Gene Bcen_4288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4288 
Symbol 
ID4094991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1507021 
End bp1508142 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content71% 
IMG OID638017579 
Productalanine racemase 
Protein accessionYP_624147 
Protein GI107026636 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0787] Alanine racemase 
TIGRFAM ID[TIGR00492] alanine racemase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGTC CCATCGTCGC CCATATCCGC CCCGACGCCG TCCGCCACAA CCTCGACTTC 
ATCCGCCGCA CCGCCGCGCA ATCGCGCGTG TGGGCCGTGA TCAAGGCCAA CGCGTACGGC
CACGGCATCG AACGGATCTA CCCGGGCCTC GCGGCCGCCG ACGGCATCGC GCTGCTCGAT
CTCGACGAAG CCGTGCGCGT GCGCGAACTC GGCTGGGACA AGCCCGTGCT GCTGCTCGAA
GGCGTCTTCG AGCCGGCCGA CGTCGAGCTG GCCGATCACC ACCGGCTGAC GGTCGCCGTG
CATTGCGACG AACAGCTCGA CCTGCTGATC GCCGCGAAGC CGCGGCAGCC GATCGACATC
CAGCTCAAGA TGAATTCCGG CATGAACCGG CTCGGCTACC GGCCGGCCGC GTTCCGCGCC
GCGTGGGAAC GCGCGGCGAG TGCGCCGTCG ATCGGCAAGA TCACGCTGAT GATGCATTTC
GCGAACGCCG ACGAAGGCGA GGTCGACTGG CAACTCGACC AGTTCGACGC GACCACGGCC
GGGATTCCGG GCGAGCGCTC GGTGTCGAAT TCGGCGGCCG TGCTGTGGCA TCCGCGCGCG
CACCGCGACT GGGTGCGACC CGGCACGATC CTGTACGGCG CGTCGCCGAC CGGCGCGGCG
CGGCATATCG CCGACACGCC GCTGATGGCC GCGATGACGC TGAGCAGCAA GATCATCGGC
GTGCAGACGC TCGCGCCCGA CGAAACGGTC GGCTACGGCC GCCGCTTCAC GGCCGACCGG
CCGATGCGGA TCGGCGTGGT CGCATGCGGC TACGCAGACG GCTATCCGCG CCACGCGCCG
ACCGGTACGC CGATCGCGGT GGACGGCGTG ATGACGCGCG TCGTCGGCCG CGTGTCGATG
GACATGCTGA CCGTCGACCT GACGCCGTGC CCGAACGCGG GCATCGGCTC GCGCGTCGAG
CTGTGGGGCG ACCAGGTGAA GGTGGACGAT GTTGCGGAAG CCAGCGGCAC GATCGGCTAT
GAGCTGATGT GCGCGCTCGC GCGCCGCGTG CCGGTCGTGA TCGTGCCGCC CGGTGCGGCG
AGCGTGCAGC CAGCGCTGCG GACGGGCAGC TACGGGCGCT GA
 
Protein sequence
MPRPIVAHIR PDAVRHNLDF IRRTAAQSRV WAVIKANAYG HGIERIYPGL AAADGIALLD 
LDEAVRVREL GWDKPVLLLE GVFEPADVEL ADHHRLTVAV HCDEQLDLLI AAKPRQPIDI
QLKMNSGMNR LGYRPAAFRA AWERAASAPS IGKITLMMHF ANADEGEVDW QLDQFDATTA
GIPGERSVSN SAAVLWHPRA HRDWVRPGTI LYGASPTGAA RHIADTPLMA AMTLSSKIIG
VQTLAPDETV GYGRRFTADR PMRIGVVACG YADGYPRHAP TGTPIAVDGV MTRVVGRVSM
DMLTVDLTPC PNAGIGSRVE LWGDQVKVDD VAEASGTIGY ELMCALARRV PVVIVPPGAA
SVQPALRTGS YGR