| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4271 |
|---|
| Symbol | |
|---|
| ID | 4096011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1488326 |
|---|
| End bp | 1489492 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638017562 |
|---|
| Product | extracellular ligand-binding receptor |
|---|
| Protein accession | YP_624130 |
|---|
| Protein GI | 107026619 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATCG CTTTCTTTTC CACCCATCTC GCCTTCTCCG CGGCCGCCCT GGTCGCCACC
GTTCCCGCGT TCGCGCAGTC CGCTCCGCAG ACGGTCCTGA TCGGTCTCGC CGCGCCGCTC
ACCGGCCCGT CCGCGCGGAT CGGCAAGGAC TTGCAGAACG GCGCGCAACT CGCGATCGAC
GACGCGAACG CGAAGCATCC GACCATCGGC GGCAAGCCGG TCGTCTACAA GCTCGTCGCG
GCCGACGATC AGTCCGACCC GCGCACGGCC GTCGCGGTCG CGCAGCAACT CGTCGACCAG
CACGTGATCG GCGTCGTCGG TCACTGGAAC ACGGGCTGCA GCGTGCCGGC GTCGCGCGTG
TACCGCGATG CGGGCATTCC ACAGATCGCG CCGGCCTCCA CCGGTCATCA ATACACGCAG
CAGGGCTACG CGACGGCGTT CCGCATCATG GGTCACGACG ATGCAGGTGG ACACTTCACC
GGTGCGTACG CGGTGAAGAC GCTGAAGGCG AGGCGCATCG CGGTGCTCGA CGATCGCACG
TCGTTCGGCG CGGGGCTGGC CGACCAGTTC ATCAAGGGCG TGCAGGCGAA CGGCGGCACG
ATCGTCGATC GTCAGTACGT GAACGACAAG ACGACCGACT TCAGCGGCGT GCTGACCGCG
ATCAAGGGCA AGCGCGCGGA TCTCGTGTTC TTCGGCGGCC TCGACGCGCA GGCCGCGCCG
ATCGCGCGCC GGATGCGCCA GCTCGGCGTG AACGCGCCGC TGCTCGGTGC GGGCGGCTTC
GTGAGTCAGA CCTTTCTGTC GCTCGCCGGC AAGGACGGCG ACGGCGTGAC GGCGCTCGAA
CCGGGCCTGC CGCTCGACCG GATGCCGGGC GGCAACGCGT TCGACACGCA ATACCAGGCA
CGCTTTCACG CGCCGATCGA ACTGCATGCG CCGTTCGCGT ACGACGCGGC CGCCACGCTG
ATCGCGGCCG CGCAGAAGGC CGGCACGACC CAGCCGGCGA AGCTGGTCGC GGCCGTTCGT
GCGATCGTGC GGCCCGGCGT GACCGGGCGC ATCGCGTTCG ACGCCGAAGG CAACCTGAAG
GACCCGGCCT TCACGATCTA CCAGGTGCGC GGCGGCAAGT GGGCCGTCGT CGACGTGCTC
GGCGGCTCGC GCACCGCGGC CAAGTAA
|
|---|
| Protein sequence | MKIAFFSTHL AFSAAALVAT VPAFAQSAPQ TVLIGLAAPL TGPSARIGKD LQNGAQLAID
DANAKHPTIG GKPVVYKLVA ADDQSDPRTA VAVAQQLVDQ HVIGVVGHWN TGCSVPASRV
YRDAGIPQIA PASTGHQYTQ QGYATAFRIM GHDDAGGHFT GAYAVKTLKA RRIAVLDDRT
SFGAGLADQF IKGVQANGGT IVDRQYVNDK TTDFSGVLTA IKGKRADLVF FGGLDAQAAP
IARRMRQLGV NAPLLGAGGF VSQTFLSLAG KDGDGVTALE PGLPLDRMPG GNAFDTQYQA
RFHAPIELHA PFAYDAAATL IAAAQKAGTT QPAKLVAAVR AIVRPGVTGR IAFDAEGNLK
DPAFTIYQVR GGKWAVVDVL GGSRTAAK
|
|---|
| |