Gene Bcen_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4239 
Symbol 
ID4095587 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1444469 
End bp1445950 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content67% 
IMG OID638017530 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_624098 
Protein GI107026587 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACCC TGTCGATCAT GCTCGCCACG CTGATCCAGA CCCTCGACAG CACCATCGCG 
AACGTCGCGC TGCCGCACAT GCAGGGCACG CTGTCCGCGT CGCAGGACGA AATCACGTGG
GTGCTGACCT CCTACATCGT CGCGGCGGCG ATCGCGACGC CGCTCACCGG CTGGCTGTCC
GACCGGCTCA GCGTGAAGCG GCTGCTGATC GTATCGATTG CGGGCTTCAC GGTGGCGTCG
GCGCTGTGCG GGCTGTCGGA GACGCTCGTG CAGATCGTCG GCGCGCGGCT GCTGCAGGGT
GTGTTCGGCG CCGCACTGGT GCCGCTGTCG CAATCGATCC TGCTCGACAT CAATCCGCGC
GAGAAACAGG GCCAGGCAAT GGCGATCTGG GGAATGGGCG TGATGGTCGG CCCCATTCTC
GGCCCGACGC TCGGCGGCTG GCTCACCGAC AGCTACAACT GGCGCTGGGT GTTCTTCATC
AACGTGCCGA TCGGCGCGTT CGCGCTCGCC GGCGTGATGA CCTTCCTGCC GGCACGCGCG
CCGCGTCCGC ACGTGAAATT CGACGCGTTC GGCTTCGCGA CGCTCGCGCT CGCGATCGGC
GCGTTCCAGG CGATGCTCGA TCGCGGCGAG CAGCTCGACT GGTTCGGTTC GTACGAGATC
CGCATCGAGG CGCTCGTCGC GGCCCTGAGC TTCGCGTTCT TCCTCGCACA CACGGCGACC
GTCGGCAAGG CGTCGTTCTT CAAGTCGGAA TTGCTGCGCG ATCCGAATTT CGCGACGGGC
ACGCTGTTCA TCTTCGTGGT CGGCGCGGTG CTGTATGCCA CTCGCGCGCT GCTGCCGCCG
ATGCTGCAGA ACCTGATGGG CTATCCGGTC GCGACGACGG GCCTCGTCAC CGCGCCGAGC
GGCGCCGGCA CGATGATCGC GATGCTGTTC GTCGGGAGGC TGCTGAAATA CGTGGATGCG
CGGATGCTGC TGCTCGCCGG GCTGGCGATT TCCGCGCTCG CGCTGTGGCA GATGATGCAG
TACACGATCG TGCTGTCCGA AGCGGACATC GTATGGCCCG GCGTGATCCA GGGCTTCGGC
CTCGGGCTCG TGTTCGTGCC GCTGAGCGCG CTGTCGTTCT CGACGCTGCC GCCCGAGCTG
CGCGCGGACG GCACGGCCAC CTACAGCCTG ATGCGCAACA TCGGCAGCAG TATCGGCATC
TCGATCGTGC AGACGCTGAT GACGCGCAAC ACGCAGGTCG CGCATGCCGA CCTCGCGACC
CACATCACGC CGTTCGACCC GGCCGTGCAG GCGCTGGCCG GCAGCCGTGT CGACCTCGCG
CTGCTCGACC GCACGATCAA CCAGCAGGCC GCGATGATCG CGTACCTGAA CGATTTCAAG
CTGATGTTCG TCGCGACGCT GCTGATGATC CCGCTGTTGC TGCTGATCCG CCCGCCGCAG
AAAACGGCGA GTGTCGACGT CGCGCATGCG GCGCTGGATT GA
 
Protein sequence
MLTLSIMLAT LIQTLDSTIA NVALPHMQGT LSASQDEITW VLTSYIVAAA IATPLTGWLS 
DRLSVKRLLI VSIAGFTVAS ALCGLSETLV QIVGARLLQG VFGAALVPLS QSILLDINPR
EKQGQAMAIW GMGVMVGPIL GPTLGGWLTD SYNWRWVFFI NVPIGAFALA GVMTFLPARA
PRPHVKFDAF GFATLALAIG AFQAMLDRGE QLDWFGSYEI RIEALVAALS FAFFLAHTAT
VGKASFFKSE LLRDPNFATG TLFIFVVGAV LYATRALLPP MLQNLMGYPV ATTGLVTAPS
GAGTMIAMLF VGRLLKYVDA RMLLLAGLAI SALALWQMMQ YTIVLSEADI VWPGVIQGFG
LGLVFVPLSA LSFSTLPPEL RADGTATYSL MRNIGSSIGI SIVQTLMTRN TQVAHADLAT
HITPFDPAVQ ALAGSRVDLA LLDRTINQQA AMIAYLNDFK LMFVATLLMI PLLLLIRPPQ
KTASVDVAHA ALD