Gene Bcen_4232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4232 
Symbol 
ID4095580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1438218 
End bp1439156 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content75% 
IMG OID638017523 
ProductSH3, type 3 
Protein accessionYP_624091 
Protein GI107026580 
COG category[S] Function unknown 
COG ID[COG4991] Uncharacterized protein with a bacterial SH3 domain homologue 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGAACA CGATTGTCCG AAGTCTGTGC GTCGTCCTGG CCGGCCTCGC GGCCGCACCG 
GGCGTCGCCG ATGCGCAGAG CAGCGCTTAC ACGAACTCGC CGGCCGAGCT GTTTGCCGGG
CCGGCGCCCG ATTATCCGGT GGTCGCGCAG ATCCCGCCCG GTACCGCGCT GGATGTGTTC
GGCTGTCTGA GCGACTACGC GTGGTGCGAT GTCGCGCTGC CGGGCGTGCG CGGCTGGATC
GATGCGCAGT TGCTCGACTA TCCGTACCAG GGCAGCTACG TGCCGTTGCT CCAATACGGC
GCGATCATCG GCGTGCCGGT GACCGGTTTC GCGATCGGCG CGTACTGGGA TCGCTATTAC
CGGCACCGCC CGTGGTATCC CGACCGTGAT CGCTGGGCGC ATCGTGCGGA GCCGAGGCTC
GGCCCCGGCG GCGTGCCGCC CGCGCAAGGG CGTCCGCAAC CGGGTGCGCC GATGCAGGTC
GCGCCGGGCG GCCCGCCGCC CGTGCATGAC ACGCGGCCGT CGGCGACGCG CGGCGGCTGG
AACGGCGCGA ACCGCGTGCC GCCGCCGGCT GCACCGGCGC CGGCGCCGAT GCCGGGTGGC
GTGGGTAATG CGCGTCCGGC CAGCCCGCCG ACGCCGATGC CGGGCGGGAT GGGTAATGCG
CGCCCGGCCA ACCCGGCGGC ACCGACGCCG ATGCCGGGTG GGATGGGTAA TGTGCGTCCG
GCCAGCCCGG CGGCGCCGAC GCCGATGCCG GGCGGGGCGG GTAACACGCG CCCGGCCAGC
CCGCCGCCCG CGCCGGGCGG CGAAGCCCGC ACGATGCCTC AGCCCGCGCG CCAGGGAGGT
TGGGGCGGCG GCGGTTATGC GCGGCCGCAA GGCGGCGGAA ACGGCGGCGG CAACCATGGC
GGCGGTGGAG GCGGCGGTCC CGACGAACTC CGCCACTGA
 
Protein sequence
MRNTIVRSLC VVLAGLAAAP GVADAQSSAY TNSPAELFAG PAPDYPVVAQ IPPGTALDVF 
GCLSDYAWCD VALPGVRGWI DAQLLDYPYQ GSYVPLLQYG AIIGVPVTGF AIGAYWDRYY
RHRPWYPDRD RWAHRAEPRL GPGGVPPAQG RPQPGAPMQV APGGPPPVHD TRPSATRGGW
NGANRVPPPA APAPAPMPGG VGNARPASPP TPMPGGMGNA RPANPAAPTP MPGGMGNVRP
ASPAAPTPMP GGAGNTRPAS PPPAPGGEAR TMPQPARQGG WGGGGYARPQ GGGNGGGNHG
GGGGGGPDEL RH