Gene Bcen_4202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4202 
Symbol 
ID4094522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1400609 
End bp1401541 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content67% 
IMG OID638017493 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_624061 
Protein GI107026550 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGAATT TCCTCGTCAA ACGCCTGTTC GGCCTGCTGC CCACGCTCGC GATCGTCGCG 
GTGCTGGTGT TCCTGTTCGT GCACCTGCTG CCCGGCGACC CGGCGCGGCT CGCGGCCGGC
CCCGAAGCCG ACGACGCGAC GGTCGCGCTC GTGCGTGCCG ATCTTGGGCT CGACAAGCCG
ATGCCGACCC AGTTCGCGAA CTTCTTCGTG AAGATCGCGC ACGGCGATTT CGGCATCTCG
ACGCGCAGCA AGCGGCCGGT GTCGACCGAG ATCGGGGAGC GCTTCATGCC GACGCTGCTG
CTCACGCTCG TCAGCATGGT GTGGGCGACG GCGATCGGGA TGGCGATCGG GATCGCGTCG
GCCGTGTGGC GCAATCGCTG GCCCGACCGA CTCGGGATGA CGATCGCGGT GTCGGGTATT
TCGTTTCCCG CGTTCGCGCT CGGCATGCTG CTGATGGAGA TCTTCTCGGT GAAGCTCGGC
TGGCTGCCGG TCGTGCCGGA CGGCACGTGG AAGAGCTACG TGCTGCCGTC GCTGACGCTC
GGCGCCGCGG TCGCCGCCGT GATGGCGCGC TTCACGCGCG CGTCGTTCGT CGAGGTGCTG
AACGAGGACT TCGTGCGCAC CGCGCGCGCG AAGGGCGTGC ACGAGCCGAT GGTCGTGCTC
AAGCATTGCC TGCGCAACGC GATGATTCCG GTCGTCACGA TGATGGGGGC TGCAGTTCGG
CTTCCTGCTC GGCGGCTCGA TCGTCGTCGA GGCCGTGTTC AACTGGCCGG GGCTCGGCCG
CCTGCTGGTC GATGCGGTGA CGATGCGCGA CTACCCGGTG ATCCAGGCGA TCGTGCTGCT
GTTCTCGCTG GAATTCATCC TGATCAACCT GACCGTCGAC GTGCTGTACG CGGTCATCAA
CCCGACCATC CGGTTCAAGT GAGGCCAGCA TGA
 
Protein sequence
MLNFLVKRLF GLLPTLAIVA VLVFLFVHLL PGDPARLAAG PEADDATVAL VRADLGLDKP 
MPTQFANFFV KIAHGDFGIS TRSKRPVSTE IGERFMPTLL LTLVSMVWAT AIGMAIGIAS
AVWRNRWPDR LGMTIAVSGI SFPAFALGML LMEIFSVKLG WLPVVPDGTW KSYVLPSLTL
GAAVAAVMAR FTRASFVEVL NEDFVRTARA KGVHEPMVVL KHCLRNAMIP VVTMMGAAVR
LPARRLDRRR GRVQLAGARP PAGRCGDDAR LPGDPGDRAA VLAGIHPDQP DRRRAVRGHQ
PDHPVQVRPA