| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4189 |
|---|
| Symbol | |
|---|
| ID | 4094509 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 1389277 |
|---|
| End bp | 1390614 |
|---|
| Gene Length | 1338 bp |
|---|
| Protein Length | 445 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638017480 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_624048 |
|---|
| Protein GI | 107026537 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.751541 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCG CGAACTTCCG CGTGTCGCCC ACACAAAACA AGACCTTCCG GAGACTGCCG
CTCATGCCTT CGCATGCCGA TTCGCCCGCT GCCCATCATG CGGGTTCGCT GACCATTTTC
CAGGGCGCCG CGCTCTATAT CGGCGCGGTG CTCGGCACCG GCGTGATCGC GCTGCCCGCG
CTCGCCGCCG ACGTCGCCGG GCCCTCCTCG CTGCTCGCGT GGGCCGCGCT CGTCGTGCTG
TCCGGGCCGC TCGCGGCCAC CTTCGCCGCA CTCGGCGCCC GCTATCCCGA TGCGGGCGGC
GTGTCGACCT ACGCGCGGCG CGCATTCGGC CCGAAGGCCG CGGCCATCGT CGGCTGGTGC
TTCTATTTCG CGGTGCCGGC CGGCGCGCCG GCCGCCGCGA TGTTCGGCGG CGCCTACGTC
GCGGCCGTCA CGGGCGGCGG ACATACGACG GTCATCGTCA CCGCCGCCGC ACTGATCGCG
ACCGTATCGG CCGCGAACGC ATTCGGCGTC ACAGTGTCGG GCCGCATGCA ACTCGTGTTG
TCGGCACTGC TCGTCGCGCT GCTGCTCGCC GCGGTGCTTG CGTCCGCGCC GCATGCGCGC
GCCGCGAACC TGCATCCGTT CGCCCCGCAC GGCTGGCTCG CGGTCGGCCA GGCCGCCGCG
CTGCTCGTGT GGAGCTTCGC CGGCTGGGAA GCCATCACGC ACCTCGCCGC CGAATTCCGC
CGGCCGGCGC ACGACATGCC GCGCTCGGCC GGCATCGCGG TCGTGGTCGT CGGGTTCCTG
TATCTGTCGG TTGCGGCCGC GAGCGTGACG GTGCTCGGGC CTTCCGCGGG CGCATCGGGC
GCGCCGCTCG CCGAACTGAT CGCGGGCGGC ATCGGCGGCC ATGCGCAGGT GCTGGCCGCC
GCCGCCGCGC TGCTGCTCAC GCTCGGCACG ATGAACGCGT ATTTCGCCGG CGCGGCCAAG
CTCGGCGCGG CGCTCGGACG CGACGGCGCG TTGCCTGCGT GGCTCGCTCA GGGCAGCCAG
GTCGGCGGCG TGCCGCGTCG CAGCCTCGGC GTGATCGCGG TGCTGGCGGC CGTCGCGCTG
GCCGCCACGG CGCTGTCGGA CGTCGGGCCG AAGCCGCTCG TGCTCGTGAC GTCCGGATGT
TTCGTGATGG TGTACGGGCT CGGCGCGGCC GCCGCGCTGA AGCTGCTGCC GCGCGGCGGC
ATCGCGTACC GCTGCGCGTG GATTTCGCTG ATTGCGGTCG CCGGGCTGTT CGTGACGACC
GGCTGGTATT TCCTGTGCCC GCTGCTGCTT GCGGGCGGTG CGCTGCTTTA TCTGCAGATC
ACCGGCCCGC GTCGATGA
|
|---|
| Protein sequence | MDRANFRVSP TQNKTFRRLP LMPSHADSPA AHHAGSLTIF QGAALYIGAV LGTGVIALPA
LAADVAGPSS LLAWAALVVL SGPLAATFAA LGARYPDAGG VSTYARRAFG PKAAAIVGWC
FYFAVPAGAP AAAMFGGAYV AAVTGGGHTT VIVTAAALIA TVSAANAFGV TVSGRMQLVL
SALLVALLLA AVLASAPHAR AANLHPFAPH GWLAVGQAAA LLVWSFAGWE AITHLAAEFR
RPAHDMPRSA GIAVVVVGFL YLSVAAASVT VLGPSAGASG APLAELIAGG IGGHAQVLAA
AAALLLTLGT MNAYFAGAAK LGAALGRDGA LPAWLAQGSQ VGGVPRRSLG VIAVLAAVAL
AATALSDVGP KPLVLVTSGC FVMVYGLGAA AALKLLPRGG IAYRCAWISL IAVAGLFVTT
GWYFLCPLLL AGGALLYLQI TGPRR
|
|---|
| |