Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4166 |
Symbol | |
ID | 4095927 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 1355986 |
End bp | 1357239 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638017460 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_624028 |
Protein GI | 107026517 |
COG category | [R] General function prediction only |
COG ID | [COG2244] Membrane protein involved in the export of O-antigen and teichoic acid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.507145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGCCG TTCGAAAAAA TTTTGCGTTG TTGTTTGCGC TGCAGATCTC GACGTACGTC GTGCCGCTCG TCACGCTGCC GCTCCTGACG CGCGTGCTCG GCCCCCAAGA GTACGGCCGG CTATCGTTCG TGCTTGCGGT GACGACGTAT TTCATCAATC TCGCGAACTA TAGTTTCGAC CTGACGGCAA CGCCGCGTGT CGCCCTCGCA AACGACAGGA TGGAGCGGTC GCGCATTTTC TGGACGACGG TTTGCGCCCA ATGGGCGATC ACCGTCGCCG GCTTCGGGTT GCTCGTCGCG CTGACCATGC TCATTCCTCA TTTTGCCGCG GAGCGCAGAG CGCTGCTGAT CGGTTTCGGG ATGGCGATCG GTGCCGCGCT GACGCCGGGC TGGTATTTTC AGGGTATTCA GAAGCTGAGT GTCTATAGCG TGACGGTGGT GGTGTACCGG GTACTCAGTG TCGCTGCCAT CTTCCTGTGG GTGCGCACGG AGGACGACCT CCTGCATGCA GTCGCGATCA ATACGGCCGT GCCATTGCTG TGCGGGATCA CGCTGCTGGC GTACCTGTTC TTTCATCGCG AGGTCGAGCG CGTTCAGGTG CGACTTTCGG ACGTCGTCGA AGCGTTGAAA GGCGGCTTTC AGGTGTTCCT CGCCTCGACG TCGATCTCGT TTTACGCGTC GACCAATACC GTCCTGCTGA GCATGGTTTC CGGTAACGTC GCCGCAGGCT ATTTTGCGGC CGGTGACAAA CTCATCCGTG CCGCGGTCGG CTTGTTGCAA CCGCTCAGGG CGGCAACCTA TCCGCACGTG ACCTACCTGA TGCATCACGC GCGCGACGAA GCATTCGCAT TCCTGCGCAA GCTGATCGTC ATGCAAGGCG CGCTGGTGCT GGCCATGTCG GCGACGATCT ATGCATGCGC GCCGCTGGCG GTCCGTATCC TGTACGGCAG CTCGTTTGCG CCGACGATCG GCGTGCTGCA TTGCCTGGCG CTGGTGCCGT TCATGGCATG CATGACCGAC CTGTTCGGCG TTCAAACGAT GTTGCCGCTC GGGATGAAGC GGGCGTTCAG CGTCATCCTG ATCTCGTCGG GCGCGTTGAA CGTGACGTTG CTTCCTCCGC TCGCGATGCT GTTTGCCGAA CGTGGCGCGG CGATCGCGGT GCTGATCGCC GAAACGGCCG TCGCCGTCGC GCTTGCATAC GTCCTTCGCC GTGAACGCGT CGGCGTGCTC GATCTGTCGG CGCGTTCCGG TTGA
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Protein sequence | MTAVRKNFAL LFALQISTYV VPLVTLPLLT RVLGPQEYGR LSFVLAVTTY FINLANYSFD LTATPRVALA NDRMERSRIF WTTVCAQWAI TVAGFGLLVA LTMLIPHFAA ERRALLIGFG MAIGAALTPG WYFQGIQKLS VYSVTVVVYR VLSVAAIFLW VRTEDDLLHA VAINTAVPLL CGITLLAYLF FHREVERVQV RLSDVVEALK GGFQVFLAST SISFYASTNT VLLSMVSGNV AAGYFAAGDK LIRAAVGLLQ PLRAATYPHV TYLMHHARDE AFAFLRKLIV MQGALVLAMS ATIYACAPLA VRILYGSSFA PTIGVLHCLA LVPFMACMTD LFGVQTMLPL GMKRAFSVIL ISSGALNVTL LPPLAMLFAE RGAAIAVLIA ETAVAVALAY VLRRERVGVL DLSARSG
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