Gene Bcen_4112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4112 
Symbol 
ID4093967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1291642 
End bp1292676 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content67% 
IMG OID638017406 
ProductABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components 
Protein accessionYP_623974 
Protein GI107026463 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.463971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCACA CCACCGCACC CGCGCCCGCC GACACGCACG ACGACCAACG CCGCCGGCTG 
CTGCGCGCGG CCGGCGCCGC CGCGCTCGCC GTCCCTGCGA TCACGCTCGG CCGCAAGGCG
TGGTCCGCGC CGCCGCTGAA GAAACTCACG TTCGCGTGGA ACCAGAACGC GTTCTGCCTG
ACGCCGATCG TCGTCGCGCA GGAGCGCGGC TTCTTCGAGA AGAACGGGCT GCAGGTCGAT
CTGATCAACT ACAGCGGCTC GACCGATCAA CTGCTCGAAT CGATCGCGAC CGGCAAGGCC
GATGCGGCGG TCGGGATGAT CCACCGCTGG CTGAAGCCGC TCGAAGCCGG CTTCGACGTG
AAGATCATCG GCAGTTCGCA CGGCGGCTGC GTGCGCCTGC TCGGCGCGAA GGCGGCCGGC
GTCACGACGC TGCAGGCGCT GAAGGGCAAG ACGGTCGGCG TCAGCGATCT CGCCGCGCCC
GGCAAGCACT TCTTCTCGAT CCTGCTCGCG AAAAATGGCG TCGATCCGGA GCGCGACATC
ACGTGGCGGC AGTATCCGGC CGACCTGCTC GGCGTCGCGG TCGACAAGGG CGAGATCCAC
GCGATCGCCG ACGGCGACCC GAATCTGTAT CTGCTCGAAA AGCGCAGCAA CGGCGCGTAC
ACCGAACTCG CGACCAACCT GTCCGGCGAA TACGCGCGCA AGGTGTGCTG CGTGATCGGC
GCGCGCGGCG ACCTCGTGCG CAACGACCGG CCGTCGGCCG CCGCGCTCGC GCGCTCGATC
GTGCAGGCCA CCGAATACAC GCACGACAAC CCGAACGAAG CCGCCAAGGT GTTCGCGAAG
TATTCGCCGA AGATCAGCCC CGAGGATCTG CGCAAGCTGT ATGCGACGCT CACCTACACG
CATCACCCGA CCAACGTCGA CCTGCAGCAG GAAATCGCGT TCTATGCGGA CGATTTCCGC
CGCATCAGCG TGCTGAAGAA GAGCACGGAC CCGCAGCGCT TCGCGCAGCA GGTCTATGCG
AACGTACTGG GGTAA
 
Protein sequence
MTHTTAPAPA DTHDDQRRRL LRAAGAAALA VPAITLGRKA WSAPPLKKLT FAWNQNAFCL 
TPIVVAQERG FFEKNGLQVD LINYSGSTDQ LLESIATGKA DAAVGMIHRW LKPLEAGFDV
KIIGSSHGGC VRLLGAKAAG VTTLQALKGK TVGVSDLAAP GKHFFSILLA KNGVDPERDI
TWRQYPADLL GVAVDKGEIH AIADGDPNLY LLEKRSNGAY TELATNLSGE YARKVCCVIG
ARGDLVRNDR PSAAALARSI VQATEYTHDN PNEAAKVFAK YSPKISPEDL RKLYATLTYT
HHPTNVDLQQ EIAFYADDFR RISVLKKSTD PQRFAQQVYA NVLG