| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4090 |
|---|
| Symbol | |
|---|
| ID | 4093848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 1266225 |
|---|
| End bp | 1267019 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638017384 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_623952 |
|---|
| Protein GI | 107026441 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.643515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATCG ATCTGAAAGG CAAGACCGCG GTCGTCACCG CTTCCACCGC CGGCATCGGG
CTCGCGATCG CCGAAGGGCT CGCGCGAGCC GGCGCGCACG TCGTCGTCAA CGGCCGCAGC
GACCCGTCGG TGCAATCCGC GCTCGAGAAA CTGCGCGACA CCGTGCCCGG CGCAAGCTTC
GACGGCGTCG CCGCCGACCT GTCCGACGCG GCCGGCGTCG CGCGCGTCAC GCAGCACACG
CCGAATGCCG ACATTCTCGT CAACAACGCG GGCATCTACG GCCTGAAGGC GTTCTTCGAC
ATCGACGACG CCGAATGGGA ACATTATTTC CAGATCAACG TGATGTCCGG CGTGCGGCTC
GCACGGCATT ACCTGAAAGG GATGATCGAA CGCAATGCCG GGCGCATCGT GTTCATTTCG
TCGGAATCGG GCCTGAACAT CCCCGTCGAC ATGATTCATT ACGGGTTCAC GAAAACCGCG
CAGTTGTCGA TCGCGCGCGG CCTCGCGAAG CTCGCGGCCG GCACCCATGT GACCGTCAAT
TCGGTGCTGC CGGGGCCGAC GATGTCGGAA GGCGTGCGCG AGATGCTGAA GGCGCAGGCC
GACGAAACGG GCCGCAGCAT CGACGACATT GCAGTGGAAT TCGTGCGCAG CGAGCGCGCC
AGCTCGATCA TCCAGCGGCC GGCGACGACG GAGGAAGTCG CGAACCTGGT CGTGTACGTG
TGCTCGCCGC AGGCATCGGC CACGACCGGC GCGGCGTTGC GCGTCGACGG CGGTGTAGTC
GACACGATAG CGTGA
|
|---|
| Protein sequence | MQIDLKGKTA VVTASTAGIG LAIAEGLARA GAHVVVNGRS DPSVQSALEK LRDTVPGASF
DGVAADLSDA AGVARVTQHT PNADILVNNA GIYGLKAFFD IDDAEWEHYF QINVMSGVRL
ARHYLKGMIE RNAGRIVFIS SESGLNIPVD MIHYGFTKTA QLSIARGLAK LAAGTHVTVN
SVLPGPTMSE GVREMLKAQA DETGRSIDDI AVEFVRSERA SSIIQRPATT EEVANLVVYV
CSPQASATTG AALRVDGGVV DTIA
|
|---|
| |