| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4054 |
|---|
| Symbol | |
|---|
| ID | 4096068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 1225443 |
|---|
| End bp | 1226393 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638017348 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_623916 |
|---|
| Protein GI | 107026405 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCAA AGAAACCGAA GAGCCGCGCG CTGCTCGGGC AGCTCAGCGA CATGGATCTG
CGCCTGCTGC GGGTCTTCAA GGGCGTCGTG CAGTGCGGCG GGATGGCGGC GGCCGAACTG
GAACTGAATA TCGGCATCTC GACGATCAGC CGGCACGTGA AGGATCTCGA AACGCGACTT
GGCCTCGTGC TGTGCCGGCG CGGCCGCGCG GGCTTCACGC TGACGCCCGA GGGGCAGACG
GTGTACGAGG AGACGCTGCG ACTGCTCGCG TCGATGGAAG CATTTCGCAG CAGGATCGAC
GGCATTCACG ACACGATGGG CGGAGAACTT CACATCGCCG TATTCGACAA GACGGCCACC
AACCCGCATG CGCGCCTGGG CGACGCGATC CGCCAATTCG CGGACGAAGC GCCCGCCGTC
GCGCTGAACC TGCACGTCGC GTCGATCAAC GAGGTCGAGC GCGGCGTGAT CGACGGCAGC
TACCAGGTCG GGATCATTCC CGCGCACCGC AACTCGGGCA GCCTCGTGTA TTCGGCGCTG
TTCGACGAAC GGATGCTGCT CTACTGCGGC CGCCAGCATC CGCTGTTCGA CGCGCCGCAC
GGCAAGCTCA CGTGGACGAC GGTCCGCAAC CACGCGTTCG CCGGGCTCGG CTTCCATTCG
CCGAACATGG AGCTGAGCCA TCGCGCGAAG CTCACGCGCA GCGCGACCGC GTCGGACCAG
GAATCGATCG CGACGCTGAT TCTGTCGGGC CGCTATCTCG GCTTCCTGCC CGATCACTAC
GCGGAGAGTT TCGAAAACAA GGGGCTGATG CAGCCGATCG CACCGCACCG GTTCAATTAC
CGGTGCCGGT TCGTGAGCCT GCTGCGGCGC TCGCCGCGCC CGTCGCGGGC CGCGCTGCTG
TTCCAGTCGT GCCTCGAAGC CGCGCATGCG GGGGCGCTGC CGGCGGCATA G
|
|---|
| Protein sequence | MQAKKPKSRA LLGQLSDMDL RLLRVFKGVV QCGGMAAAEL ELNIGISTIS RHVKDLETRL
GLVLCRRGRA GFTLTPEGQT VYEETLRLLA SMEAFRSRID GIHDTMGGEL HIAVFDKTAT
NPHARLGDAI RQFADEAPAV ALNLHVASIN EVERGVIDGS YQVGIIPAHR NSGSLVYSAL
FDERMLLYCG RQHPLFDAPH GKLTWTTVRN HAFAGLGFHS PNMELSHRAK LTRSATASDQ
ESIATLILSG RYLGFLPDHY AESFENKGLM QPIAPHRFNY RCRFVSLLRR SPRPSRAALL
FQSCLEAAHA GALPAA
|
|---|
| |