| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4045 |
|---|
| Symbol | |
|---|
| ID | 4096151 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1215464 |
|---|
| End bp | 1216870 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638017339 |
|---|
| Product | amino acid permease-associated region |
|---|
| Protein accession | YP_623907 |
|---|
| Protein GI | 107026396 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0531] Amino acid transporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATGA TGTCGGAATC GACGGGCAGC CTGCAAGCGG CGCCTGCAAC GGAAGACGCG
CCGCGCGCGC TGTCGCAGAC GCTCAGCGTG CGCGATGCGG TGATGATCAC CGTATCGGGC
GTGACGCCGG CCAGCTCGAT CTTCGTGATC GCGCCGTTCG CGATCCAGCA GGCCGGCAGC
GGCGCCGTGC TGTCGTTCGT GCTCGGCGGC GTGCTCGCGC TGGCGTTCGC GCTCTGCTAT
GCGGAACTCA GCGCCGCGCA TCGCAGCGCG GGCGGCGAAT ACGTGATGGC CAAGCGCGTG
TTCGGCACGC TGCCCGGCTA CCTGACCTTC ATCACGGTGC TGTCGGTCAG CGTGTTCATC
CCCGCCGTGC TCGCGAGCGG CGCCGCGCCG TACCTGAACA ACGCGCTCGG CACGCACTTC
AGCAACCAGT CGGTCGCGCT GACGATCGTG CTGCTCAGCT ATCTGCTCGG CATGCTGAAC
ATCAAGACGA ACGCCTGGAT CACCGGCGCG TTCCTGGTCG TCGAAATCGG CGTGTTGATG
CTGATCGCGG GGCTCGGCTT CGGGTCGCCG CATCGCGGCG CCGAAGTGCT GATCGCCCCG
GTCGTCGCAA GCGGCAATGC GCTCGTGCCG GCGACGCTCG CGGCCATCGT GCCCGCCATC
GGCACCGCGA TCTTCTGCTA CAACGGCTTC GGCTCGGCCG CGTATCTCGC GGAAGACCTG
TGCGGCGGCA ACCGCAACGT CGCGAAGGCG GTGATCTATT CGCTGCTCGT GATCCTCGTC
GTCGAACTGG TGCCGCTCAC CGCGATCGTG CTGGGTGCGC CGTCGCTGAC GGAGCTGACC
AAAAGCGCCG ATCCGATCGG CTATGTCGTG CGCTCGCTGA GCAATCCGGC CGTGTCGCGC
GTGGTCAGCG GCGGGATCTT CCTGTCGGTG TTCAACGCGA TCATCGCGAT CGTGATCACG
ATGGGCCGCC TGCTGTACAG CAGCGGCCGG CATGCGCTCT GGTCGCGCAC CTGCAACCGC
GCGTTCTCGA CGATCCACCC GCGCCTCGAA TCGCCGTGGC TGGCGACGCT CGCGCTCGCG
ATACCGTCGG CCGGGCTCGT GTTCGTGTCG AGCCTCGACG AACTCACCGC GTTCACGGTC
GACCTGCTGC TGCTGATTTA TCTGGTCGTC GGGCTGGCCG CGCTCGCGAG CCGGTTCGTG
CGCCGCGACG TCGAGCATCA CTACCGGATG CCGCTGTGGC CCGTGACGCC GCTCGTCGCG
GTGGCGGGCG CCGCGTACAC GCTTTACACG ACGCTGGCGA CTGCGACGAA ACCGACCGAC
CTGATCATCA TCGCGGGGCT GCTGGTCGCG GCGCTCGTGA TGTACGTGGC CTGGGCGCGC
CACAGCGAAG CATTCCGCGC GCTCTGA
|
|---|
| Protein sequence | MAMMSESTGS LQAAPATEDA PRALSQTLSV RDAVMITVSG VTPASSIFVI APFAIQQAGS
GAVLSFVLGG VLALAFALCY AELSAAHRSA GGEYVMAKRV FGTLPGYLTF ITVLSVSVFI
PAVLASGAAP YLNNALGTHF SNQSVALTIV LLSYLLGMLN IKTNAWITGA FLVVEIGVLM
LIAGLGFGSP HRGAEVLIAP VVASGNALVP ATLAAIVPAI GTAIFCYNGF GSAAYLAEDL
CGGNRNVAKA VIYSLLVILV VELVPLTAIV LGAPSLTELT KSADPIGYVV RSLSNPAVSR
VVSGGIFLSV FNAIIAIVIT MGRLLYSSGR HALWSRTCNR AFSTIHPRLE SPWLATLALA
IPSAGLVFVS SLDELTAFTV DLLLLIYLVV GLAALASRFV RRDVEHHYRM PLWPVTPLVA
VAGAAYTLYT TLATATKPTD LIIIAGLLVA ALVMYVAWAR HSEAFRAL
|
|---|
| |