Gene Bcen_4042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4042 
Symbol 
ID4096148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1211601 
End bp1213784 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content68% 
IMG OID638017336 
Productfusaric acid resistance protein region 
Protein accessionYP_623904 
Protein GI107026393 
COG category[S] Function unknown 
COG ID[COG1289] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.599052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCCAC AACCTGCGAT CGAGCGACCT TCCATCGAAC CGGCACGATG GAGGCCATGG 
CTCGATCCGC TCGGCAACGC GGCGCGCGAC TGGGCCGCGA CCGACGGGCT GATCTGGCTG
CATCTCGCGA AAACCGTGCT CGCGGCGCTG CTGGCGATGG GCATCGCGAT GCGTCTGGAA
ATGTCGCAGC CGCGCACCGC GATGACGACC GTGTTCGTGC TGATGCAGCC GCTGTCGGGC
ATGGTGTTCG CGAAAAGCTT CTACCGCGTG CTCGGCACGG CGGCCGGCCT CGTCGGCGCG
CTCGCGCTCG GTGGGTTGTT CGCGCAGCAG CCGGAGCTGT ACATGGCCGG CATCACGCTG
TGGATCGGCG GCTGCATCGC GCTCGCGGTG CGCAACCGCC ACTTCCGCTG GTACGGCTTC
GTGCTCGCCG GCTACACGGC CGCGCTGATC GGCCTGCCGG CCGTGATGAC ACCGCAGACG
CTGTTCCAGT CCGCGCTCAC GCGCGCCGCG GAAGTCGCAC TCGGCATCGC GTGCTCGGGC
GCGGTCAGTG CGTTGATCCT GCCGTTGAGT TCCGCGAAGG CGCTGATGCG TTCATTGAGC
GCGCGCCACG CGACGTTCGC GGCGTTCACG GCCGGCGCGC TGGCGGGCGA CGTCGCGCGC
GGCGATTTCG AGCGGCGCTT CGCCGATTTC GTCGACGACA TCGTCGGCTT CGAAGCCAAT
CGTGCATTCG CATCGTTCGA GGACCCGCAC ATTCGCGCGC GCAGCCGTCG GCTCGCGCGG
CTGAACAGCG AGTTCATGAA CGCGTGCACG CGGCTGCATG CGCTGCATCA ACTCGTCAAA
CGGCTGCGTG CGAACCAGTC GGACGCTGTG CTCGACGCGC TGGCGCCGCA CGTCGACGCG
CTCGCCCAGC GCTTCGCCGC GTTGCGCGAC GAACGCCAGC GCGGCATCGC ACCGGCCACC
GGCGCGCTGC TCGAACTGCG CCGCTTCCAC GGTGCGTTGC CGAAGACCGC GCGCGCGTCG
CGGCGAACCC TCGAGGACCA TGCGGCCGGC GGCCTGCTCG ACTTCGATAC CGCGATCGAG
CTGCTGTACC GGTTCATCGG CGAATATCTC GGCTACGTCG ACACGTACGC GTCGCTCGAC
CAGGACGATC ACGCGTTCGA GCGCTCGGTC ACGCATTACG CGGTGAAAAC CAATGCGTTC
TTCGTCGGTT TCGCCTTCCT GCGCACGGTG GTCGCCGTCG GCGCGATGAG TGCATTCTGG
ATCGCGTCGG AATGGCCGAG CGGCTCGCTC GCGGTGATCG CCACCGCGAT CGCGTGCGCA
CTCAGCTCGA CGTCGCCGCG CGCGCCGAAG TTCGTCGCGC AGATGGGCGT CGGGGCGGCG
TTCGCGACCG CCGTCGGCTA CCTGTTCCTG TGCTACGTCT ATCCGAACAT CGACGGTTTT
CCGCTGCTGT GCGCGGCGCT CGCGCCGGTG CTCGGCCTCG GCGCGTTCCT CGCGATGCGG
CCGGGCCTGT CCGGCTACGG GATCGGCTTC GCGGTGTTCT TCTGCTTGCT TGCGGGCCCC
GACAACACGA TCGCGTATAC GCCTGAAGTG CTGATCAACA ACGGGCTGGC GGTCGTGGTC
GCGATGCTCG CGTGCTCGCT CGTGTTCGCA GTCGTATTCC CGACCCACAT GCCCTGGCTC
ACCGGCCGGA TCGCGCACGA CTTGCGCCGC CAGGTGACGC TTGCATGCGA AGGCGCGCCG
GACGGCCTCG CGCAGCGCTT CCAGTCGAGC ACGCACGACC TGATGGCGCA ACTGCGCACG
CTGCTGGTGC GCCGTACGCG GCAGCATCGC GATGCACTGC GCTGGATGCT GTCGACGCTC
GAGGTCGGCC ACGCGGTCAT CGACCTGCGC GACGAGCTGC ACGCGTTCTG CGCGTCGAAA
CCGCCGCAGA CGCTGCGCTG GATCGGTTCG ATCGATGCGG TGCTGAACGA ACTGCCGCGC
TTCTTCGACG ATCCGACGCC CAGTCGCCAT GCGCGTACGC TGAAATCGGT GAATCTCGCG
ATTCGCGCGG CACAGCACAC GCTGCAGGCG TGGTACGCGG TGCCCGACGC GCGCCGCAGC
ATGCAAAGGA TCGTCGGCTG CCTGCACTTC ATGCGCAGCG CGCTGCTGGA CAAGGACGCG
CCGTTCAACC GGCACCGCCA TTGA
 
Protein sequence
MKPQPAIERP SIEPARWRPW LDPLGNAARD WAATDGLIWL HLAKTVLAAL LAMGIAMRLE 
MSQPRTAMTT VFVLMQPLSG MVFAKSFYRV LGTAAGLVGA LALGGLFAQQ PELYMAGITL
WIGGCIALAV RNRHFRWYGF VLAGYTAALI GLPAVMTPQT LFQSALTRAA EVALGIACSG
AVSALILPLS SAKALMRSLS ARHATFAAFT AGALAGDVAR GDFERRFADF VDDIVGFEAN
RAFASFEDPH IRARSRRLAR LNSEFMNACT RLHALHQLVK RLRANQSDAV LDALAPHVDA
LAQRFAALRD ERQRGIAPAT GALLELRRFH GALPKTARAS RRTLEDHAAG GLLDFDTAIE
LLYRFIGEYL GYVDTYASLD QDDHAFERSV THYAVKTNAF FVGFAFLRTV VAVGAMSAFW
IASEWPSGSL AVIATAIACA LSSTSPRAPK FVAQMGVGAA FATAVGYLFL CYVYPNIDGF
PLLCAALAPV LGLGAFLAMR PGLSGYGIGF AVFFCLLAGP DNTIAYTPEV LINNGLAVVV
AMLACSLVFA VVFPTHMPWL TGRIAHDLRR QVTLACEGAP DGLAQRFQSS THDLMAQLRT
LLVRRTRQHR DALRWMLSTL EVGHAVIDLR DELHAFCASK PPQTLRWIGS IDAVLNELPR
FFDDPTPSRH ARTLKSVNLA IRAAQHTLQA WYAVPDARRS MQRIVGCLHF MRSALLDKDA
PFNRHRH