| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4024 |
|---|
| Symbol | |
|---|
| ID | 4096208 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1193690 |
|---|
| End bp | 1195000 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638017318 |
|---|
| Product | FAD dependent oxidoreductase |
|---|
| Protein accession | YP_623886 |
|---|
| Protein GI | 107026375 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.488918 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCAA CGACTGCGGC ACCCGGACGG CCCGACGCAC AGTGGCCGGA TTCGCTGTGG
GCGGCGACCG CCGCGCCGGC ACCCGATACG CCCGCGCTCG ACGCATCGGT GTCGTGCGAC
GTGGCGATCG TCGGCGCCGG CTTCACGGGC CTGTCGACCG CACTGCATCT GGCCGAACGT
GGCGTGAACG TTCGCGTGAT CGATGGCGCG CAGCCGGGCT GGGGCGCATC GGGCCGCAAC
GGCGGGCAAG TGATTCCCGG GCTGAAATAC GACCCCGACG AACTGGTCCG CCGGTTCGGC
GACGAGGCCG GCGAGCAGCT TGCCGGTATC GTCGGCGGTG CGGCCGATAC CGTGTTCGAC
CTGATCGCGC GGCACGCGAT CGACTGCGAT GCGCGTCGCG AGGGGTGGAT TCAACCCGCG
CCGACCACAG CGATGCTCGA CACGGTTGCA CGCCGTGCGC AGCAATGGGC GGCGCGCGGC
GCGCCGGTCG ACGTGCTCGG CCGCGACGAC GTCGCGCGAC GGCTCGGTAC GCCAGCGTAT
GCGGGCGGCT GGATCGATCG CCGTGCCGGC AGCGTGCAGC CGCTCAGCTA TACGCGCGGT
CTCGTGCGGG CAGCTCAGGC GAGCGGGGCG GTCGTGCACG GGTCGACCCG CGCCGTCGGG
CTGACACGTG CCGACGGCCG CTGGCGGGTC GCGACGTCCG GCGGCGCGAC GCTGTCGGCC
GAGCGCGTCG TGATCGCGAC CAACGGCTAC ACGGACGGGC TGTGGCCCGG CTTGCGCCAG
TCGGTGATCG CCGCGAACAG TTTCATCGTC GCGACGGAGC CGCTCGCGCC GGCGCTCGGC
CGCGACATCC TCGCCGGCGG CGAGGTCGCA TCGGACGCGC GCCGTCTGCT GCTGTACTTT
CGCCGTGACG CGGCCGGCCG CCTGCTGATG GGCGGCCGCG GCCCGTTCGC CGAACCGCGC
GCGCCGAGCG ACTGGCGCCA TCTCGAACGC GCGACGACGC TGCTGTATCC GCAACTGAAG
GGCGTCCGGT TCGAATACCG CTGGGCGGGG CGCGTCGCGA TCACCGCGGA TTTCCTGCCG
CACGTGCACG AGCCCGCGCC GGGCGTGACG ATCGCGCTCG GCTACAACGG CCGCGGCATC
GCGATGGCGA CGACGCTCGG CAAGCATCTG GCCGCGCATC TGTCGGGCGA TGCGCAATTG
CCGCTGCCGT TCCGCGTCAC GCCGATCCGG CCCATTCCGT TGCACGGGCT GCAGCGCTTC
TATATCGCGG CCGGGGTCGC CTGGTATCGG TTGCTCGACA GCCTGTCCTG A
|
|---|
| Protein sequence | MSATTAAPGR PDAQWPDSLW AATAAPAPDT PALDASVSCD VAIVGAGFTG LSTALHLAER
GVNVRVIDGA QPGWGASGRN GGQVIPGLKY DPDELVRRFG DEAGEQLAGI VGGAADTVFD
LIARHAIDCD ARREGWIQPA PTTAMLDTVA RRAQQWAARG APVDVLGRDD VARRLGTPAY
AGGWIDRRAG SVQPLSYTRG LVRAAQASGA VVHGSTRAVG LTRADGRWRV ATSGGATLSA
ERVVIATNGY TDGLWPGLRQ SVIAANSFIV ATEPLAPALG RDILAGGEVA SDARRLLLYF
RRDAAGRLLM GGRGPFAEPR APSDWRHLER ATTLLYPQLK GVRFEYRWAG RVAITADFLP
HVHEPAPGVT IALGYNGRGI AMATTLGKHL AAHLSGDAQL PLPFRVTPIR PIPLHGLQRF
YIAAGVAWYR LLDSLS
|
|---|
| |