Gene Bcen_4007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4007 
Symbol 
ID4096270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1177524 
End bp1178531 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content67% 
IMG OID638017301 
Productproline racemase 
Protein accessionYP_623869 
Protein GI107026358 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3938] Proline racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT CCCGATCCCT GTCCACCGTC GAAGTGCACA CCGGCGGCGA GGCGTTCCGC 
ATCGTCACGA GCGGGCTGCC GCGCCTGCCC GGCGACACGA TCGTCCAGCG TCGTGCGTGG
CTCAAGGCGC ACGCCGACGA GATCCGCCGC GCGCTGATGT TCGAACCGCG CGGCCACGCC
GACATGTACG GCGGCTATCT GACCGAGCCG GTCTCGCCGA ATGCCGATTT CGGCGTGATC
TTCGTGCACA ACGAAGGCTA CAGCGACCAT TGCGGCCACG GCGTGATCGC GTTGTCGACC
GCGGCCGTCG AACTCGGCTG GGTGCAGCGC ACCGTGCCGG AAACGCGGGT CGGCATCGAC
GCGCCGTGCG GCTTCATCGA GGCGTTCGTC CAGTGGGACG GCGAGCACGC GGGGCCGGTG
CGTTTCGTCA ACGTGCCGTC GTTCATCTGG CGACGCGACG TGTCGGTCGA CACGCCATCG
TTCGGCACCG TGACCGGCGA CATCGCGTAT GGCGGCGCGT TCTATTTCTA TGTCGACGGC
GCGCCGTTCG ACCTGCCGGT GCGCGAATCC GCGGTCGAGA AGCTGATCCG CTTCGGCGCG
GAAGTGAAGG CGGCCGCGAA CGCGACCTAT CCGGTCGTCC ATCCGGAGAT CCCGGAAATC
AACCATATCT ACGGCACGAT CATCGCGAAC GCGCCGCGCC ATGCGGGCTC GACGCAGGCG
AACTGCTGCG TGTTCGCGGA TCGCGAAGTC GACCGCTCGC CGACCGGCTC CGGCACCGGC
GGGCGCGTCG CGCAGCTCTA CCAGCGCGGG CTGCTCGCGG CCGGCGACAC GCTCGTCAAC
GAATCGATCG TCGGCACGGT CTTCAAGGGG CGCGTGCTGC GCGAAACGAC GGTCGGCGAC
TTTCCGGCCG TGATCCCGGA AGTGGAAGGC AGTGCGCATA TCTGCGGGTT CGCGAACTGG
ATCGTCGACG AACGCGATCC GCTCACGTAC GGATTTCTCG TGCGCTGA
 
Protein sequence
MKISRSLSTV EVHTGGEAFR IVTSGLPRLP GDTIVQRRAW LKAHADEIRR ALMFEPRGHA 
DMYGGYLTEP VSPNADFGVI FVHNEGYSDH CGHGVIALST AAVELGWVQR TVPETRVGID
APCGFIEAFV QWDGEHAGPV RFVNVPSFIW RRDVSVDTPS FGTVTGDIAY GGAFYFYVDG
APFDLPVRES AVEKLIRFGA EVKAAANATY PVVHPEIPEI NHIYGTIIAN APRHAGSTQA
NCCVFADREV DRSPTGSGTG GRVAQLYQRG LLAAGDTLVN ESIVGTVFKG RVLRETTVGD
FPAVIPEVEG SAHICGFANW IVDERDPLTY GFLVR