Gene Bcen_3991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3991 
Symbol 
ID4096254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp1158998 
End bp1160038 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content67% 
IMG OID638017285 
Productsigma-54 dependent trancsriptional regulator 
Protein accessionYP_623853 
Protein GI107026342 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAAATA TTGCAATCAA CGGAACGTGT GATGCCGTTT TTCAAAACGG CCCGCGAACG 
CCTATGGGTG AATCCGCCAA CCGGACGAAG CAGCGTGCAG ACGGTCGCCG GCTGTCCGGC 
CGGTCCGCCG CGATGCGCAC GCTGCTCGGC CGTATCGAGA AAATCGCGCC GACCCGCGCG 
AGCGTGATGA TTGCCGGCGA AAGCGGGGTC GGCAAGGATA TCGTCGCGCG TCGGCTGCAT 
GATCTGAGCG CGCGGCGTGA CGGCCCGTTC GTGCCGATGA ACTGCGGCGC GATTCCGGCC 
GAGCTTGCCG AGGCGCAACT GTTCGGGCAC GAAAAAGGCA GCTTTACCGG CGCGATCACG 
CAGCGTGAAG GTTTCTTCGA AGCCGCGCGC GGCGGCACGC TGCTGCTCGA CGAAATCGCG 
GAAATGCCGG CGGCGCTGCA GGTGAAGCTG CTGCGGGCGA TCGAGTCGAA CACGATCGTG 
CGCGTGGGCG GCACCGAGCC GATTCCGATC GACGTGCGGT TCGTCTCGGC CACTCGCCAC 
AATCCCGCCG AGGCGGTGCG CGACGGCCGG CTGCGCGAGG ACCTGTTCTA CCGGCTCGCC 
GCGTTCGCGA TCTACGTGCC GCCGCTGCGC CAGCGCGACG GCGACGTCGA GACGATCGCG 
CAGGAATTCG TCGACACGCT GAATGCGCGA CATCGCGCGC ACAAGCGGCT GACCGACGCG 
GCGATCGCCG CATTGCGCAC GTATTCGTGG CCCGGCAACG TGCGCGAACT GCACAACACG 
ATCGAGCGCG CGTACATCCT GGCGGACGAA GGCATCGACG TCGCGCTGCC GAAGCAGGCG 
CTGCCGGCAG CCGAGAGCAC GTCGGAAGGC GCGATGGCGC TGCCGGTCGG TGCGACGCTG 
CACCATGCGC AGCAACGCTT CATCGCGGAG ACGCTGCGTC ACTTCGACGG TAACAAGCCG 
CGCGCGGCTA AGGCGCTCGG CATCAGCCTG AAGACGCTCT ACAACCGGCT CGCGCTGATG 
CGCGACCAGG ACGATTCGTG A
 
Protein sequence
MINIAINGTC DAVFQNGPRT PMGESANRTK QRADGRRLSG RSAAMRTLLG RIEKIAPTRA 
SVMIAGESGV GKDIVARRLH DLSARRDGPF VPMNCGAIPA ELAEAQLFGH EKGSFTGAIT 
QREGFFEAAR GGTLLLDEIA EMPAALQVKL LRAIESNTIV RVGGTEPIPI DVRFVSATRH 
NPAEAVRDGR LREDLFYRLA AFAIYVPPLR QRDGDVETIA QEFVDTLNAR HRAHKRLTDA 
AIAALRTYSW PGNVRELHNT IERAYILADE GIDVALPKQA LPAAESTSEG AMALPVGATL 
HHAQQRFIAE TLRHFDGNKP RAAKALGISL KTLYNRLALM RDQDDS