| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3978 |
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| Symbol | |
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| ID | 4094494 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | - |
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| Start bp | 1146953 |
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| End bp | 1149253 |
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| Gene Length | 2301 bp |
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| Protein Length | 766 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638017272 |
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| Product | helicase c2 |
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| Protein accession | YP_623840 |
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| Protein GI | 107026329 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0904062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTACG TCGTCGCGGT GCGGGCGATG TGCGAGTTCA CCGCGCGGCG CGGCGATCTC
GACCTGCGCT TCACGCCCGC GCCGACCGCG CTCGAAGGCA TCGCCGGCCA CGGCGCGGTC
ACGTCGAAGC GTGGCGCACG CTACGAAACC GAGATCGCGC TGACCGGCAC GTGGGGCACG
CTCACCGTGC GCGGCCGCGC GGACGGCTAC GATCCCGTGG CGAACCGGCT CGAGGAAATC
AAGACCTATC GCGGCAGTCT CGACGCGATG CCGGCCAACC ATCGCGCGCT GCACTGGGCG
CAGGCGAAGG TCTATGCGCA CCTGATGTGC GATGCGCGCG ACCTCAAGGA AATCAACGTC
GCGCTCGTGT ATTTCGACAT CGTGTCCGAG CGCGAGACCG TGCTGACGGA AACGCTGGAT
GCCGGCACGC TCGCGACGTT CTTCGCCGAA CAGTGCGCAT GCTTCGTCGG CTGGGCCGAA
CGCGAGACGG CCCATCGCGC CGCCCGCGAC GCGGCGCTGC GTGCGCTCGC GTTTCCGCAC
GGGCAGTTCC GCAGCGGCCA GCGCGAGCTG GCGGTGGCCG TCTATCGCGC GGCGCGCGAC
GAGCAGTGCC TGATGGCGCA GGCGCCGACC GGCATCGGCA AGACGCTCGG CACCGTGTTT
CCGCTGCTGA AGGCATGCGG CGAGGGTGAG CTCGACCATG TGTTCTTCCT CACCGCGAAA
ACGCCTGGCC GCGCGCTCGC GCTCGAAGCG GCGACGACCC TCGGCGCCGG CACGCCCGCG
CTGCCGCTGC GCGTGCTGGA ACTCGTCGCG CGCGACAAGG CGTGCGAGCA TCCGGACCTC
GCGTGCCACG GCGAATCGTG CCCGCTCGCG AAAGGCTTCT ACGACCGGCT GCCGGCCGCG
CGCCATGCGG CGATCGAGGC GGGGCTGCTC GATCGCGATA CCGTACGCAC CGCGGCGCTC
GCGCACGACG TCTGTCCGTA TTACCTGGCG CAGGAGCTTG CACGCTGGTC GGACATGATG
ATCGGCGACT ACAACTACTA CTACGACGGC AGCGCGATGC TGCACACGCT CGCGCAGCAG
AATCAGTGGC GGGTCGGCGT GCTCGTCGAC GAAGCGCACA ACCTGCTCGA CCGCGCGCGC
AAGATGTACA GCGCGTCGCT CGATCCGTTC GCGTTCGCGG CTGCGCGCGA AGCCGCGCCT
GCCGCGCTGC GCAAGGCGTT CGACCGGCTC GCCCGCGCGT GGGGCACGCT CAATCGCGCG
CAGGCCGAGC GCTATGCGGC CTATCCCGAG GTGCCGGGCC CGATCGTGTC GGCCGTGCAA
AACCTCGTTG CGGCGATCGG CGAACACCTG ACCGACGCAC CGCGCGCGAA CGGCGACGCG
CTGCTGCGCT TTCATTTCGA GGCGATCCAG TTCGGCATGC TGGCCGAAGC ATTCGACAGC
GCATCGATCT TCGACGCGAC GCTGCATGGC GAACCGATGC CGCGCCAGCC AGTACTCGAC
GGCGTCGCGA CGGCCGGCCG CCGGCGTCGC GTCCAGTCGG CGCTGTGCGT GCGCAACGTG
ATCCCGGCCG GTTTCCTCGC GCCGCGCTAC GAAGCCGCGC GGGCGACCGT GCTGTTCTCG
GGCACGCTGA GCCCGTTCCA TTTCTACCGC GACACGCTGG GGCTGCCCGG CGACACGGGC
TGGCTCGACG TCGACGGGCC GTTTCGCGCC GAGCAACTGA CGGTGCGCGT GGCAAGCCAC
GTGTCGACAC GCTGGCGCGA CCGCGATCGC TCGCTCGAGC CGATCGCCGA CCTGATCGCC
GCGCAATACG CGGCACGGCC CGGGAACTAT CTCGGCTTCC TGAGCAGCTT CGACTACCTG
GGGCGCGTGG TCGCGCTGAT GCAGACGCGC CATCCGGACG TTCCCGTGTG GGCGCAGGCG
CCCGGCATGG CCGAAAGCGA ACGCGACGCG TTTCTCGCAC GCTTCGACGC CAGTGGACGC
GGCGTGGGCT TCGCGGTGCT GGGCGGGGCC TTCTCGGAAG GCGTCGATCT GGTGGGCGAG
CGGCTGATCG GCGCGTTCAT CGCGACGCTC GGGCTGCCGC AGGTCAACGA CATCAACGAG
CAGATGCGGC GCGCGATGGA AGCTCGCTTC GGCAACGGTT ACGACTACAT GTACCTGTAT
CCGGGGCTGC AGAAGGTCGT GCAGGCGGCC GGGCGCGTGA TCCGCACCGA GCACGACGAA
GGCGTCGTGC ATCTGATCGA CGACCGTTAC CGACGGCGCG AAGTGCGCAA TCTGCTGCCG
CGGTGGTGGC GGATCGGGTG A
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| Protein sequence | MSYVVAVRAM CEFTARRGDL DLRFTPAPTA LEGIAGHGAV TSKRGARYET EIALTGTWGT
LTVRGRADGY DPVANRLEEI KTYRGSLDAM PANHRALHWA QAKVYAHLMC DARDLKEINV
ALVYFDIVSE RETVLTETLD AGTLATFFAE QCACFVGWAE RETAHRAARD AALRALAFPH
GQFRSGQREL AVAVYRAARD EQCLMAQAPT GIGKTLGTVF PLLKACGEGE LDHVFFLTAK
TPGRALALEA ATTLGAGTPA LPLRVLELVA RDKACEHPDL ACHGESCPLA KGFYDRLPAA
RHAAIEAGLL DRDTVRTAAL AHDVCPYYLA QELARWSDMM IGDYNYYYDG SAMLHTLAQQ
NQWRVGVLVD EAHNLLDRAR KMYSASLDPF AFAAAREAAP AALRKAFDRL ARAWGTLNRA
QAERYAAYPE VPGPIVSAVQ NLVAAIGEHL TDAPRANGDA LLRFHFEAIQ FGMLAEAFDS
ASIFDATLHG EPMPRQPVLD GVATAGRRRR VQSALCVRNV IPAGFLAPRY EAARATVLFS
GTLSPFHFYR DTLGLPGDTG WLDVDGPFRA EQLTVRVASH VSTRWRDRDR SLEPIADLIA
AQYAARPGNY LGFLSSFDYL GRVVALMQTR HPDVPVWAQA PGMAESERDA FLARFDASGR
GVGFAVLGGA FSEGVDLVGE RLIGAFIATL GLPQVNDINE QMRRAMEARF GNGYDYMYLY
PGLQKVVQAA GRVIRTEHDE GVVHLIDDRY RRREVRNLLP RWWRIG
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