| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3960 |
|---|
| Symbol | |
|---|
| ID | 4095857 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1128746 |
|---|
| End bp | 1130965 |
|---|
| Gene Length | 2220 bp |
|---|
| Protein Length | 739 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638017254 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_623822 |
|---|
| Protein GI | 107026311 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1529] Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCGAG GACTGATCGA AGCAGGTCGG GCGACTGCGG GCGTATCGCG CCGGTCGTTT
CTGAAACTCG GCATGTCGCT CGGCGCGGCC GCCGGCGGCG GCTTGCTGCT CGGCTTCAGC
CTGCCGGCGG CGGGCGACGA TGCGCGCCGC TCGGTGATCG GCGGTGACGC AGCCGAACCC
GCGCAGCCCG GCGTGTTCGC GCCGAATGCG TTCGTGCAGA TCGACCGCGC CGGCAAGGTC
ACGCTGGTGA TGCCGAAGGT CGAGATGGGG CAGGGGGTCT ATACGGCGCT GCCGATGCTG
ATCGCGGAAG AACTCGAAGT GCCGCTGTCG AGCGTGACGC TCGATCATGC GCCGCCGAAC
GAGAAGCTGT TCCTCGATCC GCTGCTCGGC GGCCAGCTCA CCGGCGGCTC GACGTCGGTA
CGCTACGCGT GGGACCCGCT GCGCCAGGCG GGCGCCACCG CGCGCACGCT GCTGGTCTCG
GCGGCCGCGA AGCAATGGAA CGTCGATCCG GCGAGCTGCC GCGCGGCGAA CGGCGAAGTG
CAGCATCCGC CGAGCGGCCG GCGCGCATCG TATGGCCAGC TGGCCGACGC CGCGGCGAAG
CTGCCGGTGC CGAAGGACGT CGTGCTGAAG AAGCCGGCGG ATTTCAAGCT GATCGGCACG
CCCGCGAAGC GCCTCGATTC GCCGGAGAAG GTCGACGGCA CCGCGCAGTT CGGGCTCGAC
GTGCGCCTGC CCGGCATGCT GTACGCGGTG ATCGTGAACA GCCCGGTGTT CGGCGGCACG
GTCGCGAGCG TCGACGACAC GGCCGCGAGG AAGATCCCCG GCGTTCGCCA GGTCGTGCGC
GTCGACAATG CGGTCGCGGT GGTCGGCGAT CACACGTGGG CCGCGAAGCG CGGCGCATCG
GCGCTCGTCG TGAAGTGGAA CGAAGGCGCG GGCGCGAAGG TGTCGACCAA GGACCTGTTC
GCGGATCTCG CGCAGGCGGC GGCGAACGGC AAGGGCGCGG TCGCACGCAA GGAAGGCGAC
GTCGGCAAGG CGTTCGCGAA CGCGAAGACG CGCGTCGACG CCGTCTACGA ACAGCCGCTG
CTCGCCCACG CGACGATGGA GCCGGTGAAC TGCACGGTGC ACGTGCGTGG CGACGGCTGC
GAGATCTGGG TCGGCACGCA AGTACCGACC CGCGCACGCG ACACGGCGCA GCAATTGACC
GGGCTGTCGC CGGACAAGAT CGTCGTGCAC AACCATCTGC TCGGTGGCGG ATTCGGCCGA
CGGCTCGAGA CCGACATGAT CGGCCAGGCC GTGAAGGTCG GCAAACAGGT CAACGCACCG
GTGAAGGTGA TCTGGACGCG CGAGGAAGAC GTCCAGCACG ACATGTACCG GCCGTGCTAC
CACGACGCGA TCTCGGCCGG CCTCGACGCG AACGGCAAAC CGGTCGCGTG GCAGCACCGG
ATCGTCGGCT CGTCGATCCT CGCGCGCTTC GCGCCGCCCG CGGTCAAGGA CGGCGTCGAT
CCCGACGCGG TCGAGGTCGC GGCCGAACTG CCGTACGACC TGCCGAACCA GCTGGTCGAC
TACGTGCGCC AGGAGCCGCG CCACGTGCCC ACCGCGTTCT GGCGCGGCGT CGGGCCGACG
CGCAGCACGT TCGTCGTCGA AAGCTTCATC GACGAACTGG CCGCGCAGAC CAAGACCGAC
CCGGTGCAGT ACCGCCGCGC GCTGCTCGAC AAGACGCCGC GCGCCCGCAA CGTGCTCGAC
GTCGCGACGA AGGCGGCCGG CTGGGGCACA TCGCTGCCGA AGGGGCAAGG GCGCGGCGTG
TCGGTGATGC ACGCGTTCGG CAGCTTCTTC TCGATCGTCA TCGACGTCGC GGTGGACGGC
GGCGAGGTGC AGGTCAAGCG CGCCGTGTGC GCGGTCGATT GCGGGATGTA CGTCAATCCG
AACACGATCG AGGCGCAGGT GCAGGGCGGC ATCATCTTCG GGATCACGGG CGCGCTGTAC
GGCGAGATCA CGATCGAGGA CGGCCGCGTC GTGCAGACCA ACTTCAACGA CTACCGGATG
ATGCGAATCA ACGAGGTGCC CCCGATCGAA GTCCATCTGG TGAAGAGCGG CGAGGCGCCG
GGCGGGATCG GCGAGCCGGG CACGGCCGCG ACCGCGGCGG CGCTGTCGAA CGCGATCTTC
GCGGCCACCG GCACGCGGCT GCGCAAGCTG CCGGTCGGCA ACCAGCTGAA AACGGCCTGA
|
|---|
| Protein sequence | MSRGLIEAGR ATAGVSRRSF LKLGMSLGAA AGGGLLLGFS LPAAGDDARR SVIGGDAAEP
AQPGVFAPNA FVQIDRAGKV TLVMPKVEMG QGVYTALPML IAEELEVPLS SVTLDHAPPN
EKLFLDPLLG GQLTGGSTSV RYAWDPLRQA GATARTLLVS AAAKQWNVDP ASCRAANGEV
QHPPSGRRAS YGQLADAAAK LPVPKDVVLK KPADFKLIGT PAKRLDSPEK VDGTAQFGLD
VRLPGMLYAV IVNSPVFGGT VASVDDTAAR KIPGVRQVVR VDNAVAVVGD HTWAAKRGAS
ALVVKWNEGA GAKVSTKDLF ADLAQAAANG KGAVARKEGD VGKAFANAKT RVDAVYEQPL
LAHATMEPVN CTVHVRGDGC EIWVGTQVPT RARDTAQQLT GLSPDKIVVH NHLLGGGFGR
RLETDMIGQA VKVGKQVNAP VKVIWTREED VQHDMYRPCY HDAISAGLDA NGKPVAWQHR
IVGSSILARF APPAVKDGVD PDAVEVAAEL PYDLPNQLVD YVRQEPRHVP TAFWRGVGPT
RSTFVVESFI DELAAQTKTD PVQYRRALLD KTPRARNVLD VATKAAGWGT SLPKGQGRGV
SVMHAFGSFF SIVIDVAVDG GEVQVKRAVC AVDCGMYVNP NTIEAQVQGG IIFGITGALY
GEITIEDGRV VQTNFNDYRM MRINEVPPIE VHLVKSGEAP GGIGEPGTAA TAAALSNAIF
AATGTRLRKL PVGNQLKTA
|
|---|
| |