Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3950 |
Symbol | |
ID | 4096252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 1118792 |
End bp | 1120003 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638017244 |
Product | porin |
Protein accession | YP_623812 |
Protein GI | 107026301 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTCCT GCCAAACGAA CCAGCATGCC GGCGCACGCG TCGCGGGGAC CGTCATTGCC GCCTGCCTGA GCAGCTTCGT GCCGGATGTC GCGCATGCCC AGAGCAGCGT GACGCTGTAC GGCCTGATCG ACACGTCGAT CACCTACTCG ACCAACCAGC GCACGCGCGG TGCCGGCTCG CCCGGCGGCG GCAGCGTCGC GATGACGAGC GGCGCACTGA ACGCGTCGCG CTGGGGGCTG CGCGGCCGCG AGGATCTCGG CGGCGGAATG GCCGCGGTCT TCGCGCTCGA AAACGGCTTC TCGGGCACCA CCGGCAAGCT GTCGCAGAAA GGCGTCGACC TGTTCGGCCG CCAGGCGTGG GTCGGCGTGA GTTCGCAGAC GGCCGGCACG CTGTCCTTCG GACGCCAGTA CGACCTGATC CTCGATTACG TGACGCCGCT CGGCGCGTCC GGCCCCGGCT GGGGCGGCAA TCTCGCGGTC CACCCGTACG ACAACGACGA TTCGAACCGC AACCTGCGCA TCAACAATGC CGTGAAGTAC GCGAGCCCGA CGGTTCGCGG GTTGAGATTC GGCGCGATGG TCGGCTTCTC GAACGCGGCC GGCCAGTTCT CCAACAATGC GGTGTGGAGC ACGGGGGTGT CGTACGAGAA CGGGCCGGTG AAGCTCGGCG CCGGCTACCT GAAGATCAGC CGCGACCGCA ACGCGCCGAA CCCGGACGGC GCGCTGAGCA CGGTCGACGG CTCGGCGACG ATCACGGGCG GCAACCAGCA GATCTGGGCG ATGGCCGGCC GTTATGCGTT CGGCCCGCAC TCGGTCGGCG CGGCGTGGTC GCATTCCGCC ACCGACGGTG TGACGGGCGT GCTCCAGGGC GGCAACATCG CGCCGCTGAA GGGCGAATCG CTGGTGTTCG ACAACTTCTC GATCGACGGA CGCTACTTCG TCACGCGCGC GCTGAGCGTC GCCGCCGCGT ACACGTACAC GATGGGCCGC TTCGACACCC GCACGGGCCA GACGCGCCCG AAATGGAACC AGGTCGTCGC GCAGGCCGGC TACGTGCTGT CGAAGCGCAC GGACGCGTAT CTCGAAGGCA CTTACCAGAG CGTGAGCGGC GGCAACGGCA ATCCGGCGTT CAACGCGACC GTCTGGACCT TGACGCCTTC CGCGAACAGC AACCAGGTCG TCGTCGCACT GGGGCTGCGG CACAAGTTCT GA
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Protein sequence | MHSCQTNQHA GARVAGTVIA ACLSSFVPDV AHAQSSVTLY GLIDTSITYS TNQRTRGAGS PGGGSVAMTS GALNASRWGL RGREDLGGGM AAVFALENGF SGTTGKLSQK GVDLFGRQAW VGVSSQTAGT LSFGRQYDLI LDYVTPLGAS GPGWGGNLAV HPYDNDDSNR NLRINNAVKY ASPTVRGLRF GAMVGFSNAA GQFSNNAVWS TGVSYENGPV KLGAGYLKIS RDRNAPNPDG ALSTVDGSAT ITGGNQQIWA MAGRYAFGPH SVGAAWSHSA TDGVTGVLQG GNIAPLKGES LVFDNFSIDG RYFVTRALSV AAAYTYTMGR FDTRTGQTRP KWNQVVAQAG YVLSKRTDAY LEGTYQSVSG GNGNPAFNAT VWTLTPSANS NQVVVALGLR HKF
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