Gene Bcen_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3950 
Symbol 
ID4096252 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1118792 
End bp1120003 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content68% 
IMG OID638017244 
Productporin 
Protein accessionYP_623812 
Protein GI107026301 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATTCCT GCCAAACGAA CCAGCATGCC GGCGCACGCG TCGCGGGGAC CGTCATTGCC 
GCCTGCCTGA GCAGCTTCGT GCCGGATGTC GCGCATGCCC AGAGCAGCGT GACGCTGTAC
GGCCTGATCG ACACGTCGAT CACCTACTCG ACCAACCAGC GCACGCGCGG TGCCGGCTCG
CCCGGCGGCG GCAGCGTCGC GATGACGAGC GGCGCACTGA ACGCGTCGCG CTGGGGGCTG
CGCGGCCGCG AGGATCTCGG CGGCGGAATG GCCGCGGTCT TCGCGCTCGA AAACGGCTTC
TCGGGCACCA CCGGCAAGCT GTCGCAGAAA GGCGTCGACC TGTTCGGCCG CCAGGCGTGG
GTCGGCGTGA GTTCGCAGAC GGCCGGCACG CTGTCCTTCG GACGCCAGTA CGACCTGATC
CTCGATTACG TGACGCCGCT CGGCGCGTCC GGCCCCGGCT GGGGCGGCAA TCTCGCGGTC
CACCCGTACG ACAACGACGA TTCGAACCGC AACCTGCGCA TCAACAATGC CGTGAAGTAC
GCGAGCCCGA CGGTTCGCGG GTTGAGATTC GGCGCGATGG TCGGCTTCTC GAACGCGGCC
GGCCAGTTCT CCAACAATGC GGTGTGGAGC ACGGGGGTGT CGTACGAGAA CGGGCCGGTG
AAGCTCGGCG CCGGCTACCT GAAGATCAGC CGCGACCGCA ACGCGCCGAA CCCGGACGGC
GCGCTGAGCA CGGTCGACGG CTCGGCGACG ATCACGGGCG GCAACCAGCA GATCTGGGCG
ATGGCCGGCC GTTATGCGTT CGGCCCGCAC TCGGTCGGCG CGGCGTGGTC GCATTCCGCC
ACCGACGGTG TGACGGGCGT GCTCCAGGGC GGCAACATCG CGCCGCTGAA GGGCGAATCG
CTGGTGTTCG ACAACTTCTC GATCGACGGA CGCTACTTCG TCACGCGCGC GCTGAGCGTC
GCCGCCGCGT ACACGTACAC GATGGGCCGC TTCGACACCC GCACGGGCCA GACGCGCCCG
AAATGGAACC AGGTCGTCGC GCAGGCCGGC TACGTGCTGT CGAAGCGCAC GGACGCGTAT
CTCGAAGGCA CTTACCAGAG CGTGAGCGGC GGCAACGGCA ATCCGGCGTT CAACGCGACC
GTCTGGACCT TGACGCCTTC CGCGAACAGC AACCAGGTCG TCGTCGCACT GGGGCTGCGG
CACAAGTTCT GA
 
Protein sequence
MHSCQTNQHA GARVAGTVIA ACLSSFVPDV AHAQSSVTLY GLIDTSITYS TNQRTRGAGS 
PGGGSVAMTS GALNASRWGL RGREDLGGGM AAVFALENGF SGTTGKLSQK GVDLFGRQAW
VGVSSQTAGT LSFGRQYDLI LDYVTPLGAS GPGWGGNLAV HPYDNDDSNR NLRINNAVKY
ASPTVRGLRF GAMVGFSNAA GQFSNNAVWS TGVSYENGPV KLGAGYLKIS RDRNAPNPDG
ALSTVDGSAT ITGGNQQIWA MAGRYAFGPH SVGAAWSHSA TDGVTGVLQG GNIAPLKGES
LVFDNFSIDG RYFVTRALSV AAAYTYTMGR FDTRTGQTRP KWNQVVAQAG YVLSKRTDAY
LEGTYQSVSG GNGNPAFNAT VWTLTPSANS NQVVVALGLR HKF