Gene Bcen_3948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3948 
Symbol 
ID4096250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1116240 
End bp1117499 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content71% 
IMG OID638017242 
Productcytochrome c, class I 
Protein accessionYP_623810 
Protein GI107026299 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.130568 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCA CACTCGCTCA TCGTGTCGCG CGGGCCGCGG GCCTGCCCGC GCTCGCGGCG 
GCCTGCGCGC TGCTGCTCGC CGCCTGCGGC GGCCACGACG CGCCGGCGTC GAATGCGGCG
TCCGGCGCGC CCGGCGCCGA CCCGATCGCG CGCGGCCGCT ATCTCGTCAA GGCCGCCGAC
TGCGCGGCGT GCCACACCGC GAAGGACGGC GCGCCGTTCG CCGGCGGCGC GGCGCTCGAA
TCGCCGTTCG GCACGTTCTA CGGCTCGAAC ATCACGCCCG ACAAGGATCA CGGGATCGGC
AACTGGAGCG CGGACGACTT CTACGCCGCG CTGCATGACG GCAAGGCGCC GGGCAAGCGC
CTGTATCCGT CGATGCCGTA CACGTCGTAC CGGCAGCTCA CGCGCGCCGA CGCCGACGCG
ATGTACGCGT ACCTGATGAC GGTCAGGCCG GTCGCGCAGG AAAACCGCGC GCACGACCTG
AAGTTCCCGT ACAACCTGCG CTTCGGCATG ATGTTCTGGG ACATGCTGTT CCTGAAGGAC
AGCCTGCCGG ATGCGTCGAC CGGACAATCC GCGGACTGGC AGCGCGGCCG CTATCTCGCC
GGCGCGCTCG GCCACTGCGC GGAATGCCAC ACGCCGCGCG CATTCACGGG CCAGCTCGAC
GGCGCGAAGC CGTTCGCGGG CGCTGCGCTC GGCCGCGTGG CCGCGCCCGA CATCACGCCG
GCGGGCCTGG CCGCGCGCGG CTGGACGGGC ACCGATCTGC AGACGTTCTT CGGCGTCGGC
ATCGCGCCGC AAGGCTCCGC GTTCGGCGAG ATGTATCCGG TCGTGCACCT GAGCACGCAG
TACCTGACGA AGGACGACCT GCGCGGGCTG TCGACGTACC TGCTCGGCGA TACGCCGCCC
GCGCCGCAAC CGGTGAAGCC GGTGTCGGCC GACGCCGCGC AACTGGCCGC CGGCCGCTCG
GTGTATCTCG CGGTGTGTGC GGGCTGTCAC GGCTTCAACG GCGAAGGCAA GCCGCACGTG
GCGGTGCCGA TGAACGGCAA CTCGACGCTG CGCCAGGGCG ATCCGCGCAA CCTGCTGGTC
GCGATGCTCG ACGGTATCGA CGAGCAGAAG TTCGCCGGTT TCGAAAACCT GCAGCCGATG
CCGGGTTTCG CGAAGACGTT GAGCGATGAC GAACTCGCGC AACTCGCGAA CTACCTGCGC
GCGACGTGGG GCGGCCAGCC TGCGAGCGTC ACGGCGGCCG ATGTGAAGGC GATGCGTTGA
 
Protein sequence
MKRTLAHRVA RAAGLPALAA ACALLLAACG GHDAPASNAA SGAPGADPIA RGRYLVKAAD 
CAACHTAKDG APFAGGAALE SPFGTFYGSN ITPDKDHGIG NWSADDFYAA LHDGKAPGKR
LYPSMPYTSY RQLTRADADA MYAYLMTVRP VAQENRAHDL KFPYNLRFGM MFWDMLFLKD
SLPDASTGQS ADWQRGRYLA GALGHCAECH TPRAFTGQLD GAKPFAGAAL GRVAAPDITP
AGLAARGWTG TDLQTFFGVG IAPQGSAFGE MYPVVHLSTQ YLTKDDLRGL STYLLGDTPP
APQPVKPVSA DAAQLAAGRS VYLAVCAGCH GFNGEGKPHV AVPMNGNSTL RQGDPRNLLV
AMLDGIDEQK FAGFENLQPM PGFAKTLSDD ELAQLANYLR ATWGGQPASV TAADVKAMR