| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3935 |
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| Symbol | |
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| ID | 4096237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | - |
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| Start bp | 1100627 |
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| End bp | 1102420 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638017229 |
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| Product | amino acid ABC transporter permease |
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| Protein accession | YP_623797 |
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| Protein GI | 107026286 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.140716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA CGACCCACCT CGGCGGCGCG CTGCCGCCGC TCTCTTCCCC CGACGCACGC
GAGGCCGGCA CGCGTTTGCG GATCGTGCCC GCGCGCCACC GGTCGCGCAC GGCCGGCACC
GTGCTCGCGC TCGTGCTGAT AGCGATCACG CTGTATTCGC TCCTCGGCAA CCCGCAGTGG
GGCTGGCCGG TGTTCGCCGA ATGGTTCCTG TCGCCGCCGG TGCTATCGGG GCTCGCGCGC
ACGCTGGTGC TGACGCTGCT CGGCGCGGTG TTCGGCTTCG TGCTCGGCGC GTTCGTCGCG
CTGGCCCGGT TGTCGCGCTC GCGCCTGCTA TCCGCCAGCG CATGGACCTT CGTGTGGCTG
TTCCGCTCGA TTCCGCTGAT CGTGCTGCTG CTGATCCTGA ACAACCTCGG CTACCTGTAC
GAGCACGTGC GGCTCGGCGT GCCGTTCACC GACATCGTGT GGTTCGACAC GCCGACCACC
GACCTGATCA GCCCGTTCCT CGCGGCCGTG CTCGGCCTCA CGCTGAACCA CGCGGCGTTT
TCCGCGGAGG TAATCCGCGG CGGCATTCTC GCGGTCGACC AAGGGCAGCT CGAAGCCGCC
GCCGCGCTCG GGCTGCCGCG CGGCCGCCAG ACGTCGCGGA TCGTGCTGCC GCAGGCGATG
CGCGCGATCC TGCCGACCGC ATTCAACGAC CTGATCTCGC TCGCGAAAGG CACGTCGATG
GTGTACGTGC TCGCGATGCC CGAACTGTTC TACACGGTGC AGGTGATCTA TCGCCGCAAC
CTCGAAGTGA TTCCGCTGCT GATGGTCGCG ACCGTCTGGT ACCTGATCAT CCTGACCGTG
CTGTCCGCGA TCCAGGTGCA GGTCGAGCGG CACTATGCAC GCGGCGCGCT GCGCAATCCG
CCGCCGTCGG TGGTCACGTT CGCGCTTGCG CGCCTCGGCG GGCTGTGGCG GCGTGTCGCG
TCACGCCGTG CGGCGTCGAA TGCGCAGGCC GCAGACGACA CGCGCACCGA TACCGCGGCC
GCCGTGTCGC GTACCGGCGG CGAAGTGGCC GTGCATGGCG TGTCGAAGCA GTTCGGCATG
CAGCGCGTGC TCGACAACGT GTCGTTCGTC GCGCCGCGCG GCAGCGTGAC CGTGATCGTC
GGCCCGTCCG GCTCCGGCAA GTCGACGCTG CTGCGCACGA TCAACCATCT CGAACGCGTC
GACGACGGTT TCATCGACAT CGACGGCGAA CTGATCGGCT ATCGCCGCGA CGGCGACGTG
CTGCACGAAC TGAGCGAACG CGACGTGCTG AAGCGGCGCA CGGCCGTCGG CATGGTGTTC
CAGAACTTCA ACCTGTTCCC GCACCTGACG GTGCTCGAGA ACCTGATCGA AGCGCCGATC
GCCGTCGCCG GCGTGACGTG CGATGCGGCC GAGCACACCG CGCGCACGCT GCTCGCGCGG
GTCGGCCTCG CGGATAAAGC CGATGCGTAC CCGCGCCAGT TGTCCGGCGG CCAGCAGCAA
CGCGTCGCGA TCGCGCGGGC GCTCGCGTTG CGTCCGAAGG TGCTGCTGTT CGACGAGCCG
ACGTCGGCGC TCGATCCGGA ACTCGTCAAC GAAGTGCTCG ACGTGATCAA GGAACTCGCG
CGCTCGGGCA CGACGCTCGT GATCGTCACG CACGAAATCG GCTTCGCACG CGAAGTGGCG
GACAACGTGC TGTTCATGGA ACGCGGGCGC ATCGTCGAGG CCGGGCCGCC CGCCGTCGTG
CTCGACGCGC CGTCGCATTC GCGCACCCGC GCGTTCCTGT CGCGGGTGCT GTGA
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| Protein sequence | MSDTTHLGGA LPPLSSPDAR EAGTRLRIVP ARHRSRTAGT VLALVLIAIT LYSLLGNPQW
GWPVFAEWFL SPPVLSGLAR TLVLTLLGAV FGFVLGAFVA LARLSRSRLL SASAWTFVWL
FRSIPLIVLL LILNNLGYLY EHVRLGVPFT DIVWFDTPTT DLISPFLAAV LGLTLNHAAF
SAEVIRGGIL AVDQGQLEAA AALGLPRGRQ TSRIVLPQAM RAILPTAFND LISLAKGTSM
VYVLAMPELF YTVQVIYRRN LEVIPLLMVA TVWYLIILTV LSAIQVQVER HYARGALRNP
PPSVVTFALA RLGGLWRRVA SRRAASNAQA ADDTRTDTAA AVSRTGGEVA VHGVSKQFGM
QRVLDNVSFV APRGSVTVIV GPSGSGKSTL LRTINHLERV DDGFIDIDGE LIGYRRDGDV
LHELSERDVL KRRTAVGMVF QNFNLFPHLT VLENLIEAPI AVAGVTCDAA EHTARTLLAR
VGLADKADAY PRQLSGGQQQ RVAIARALAL RPKVLLFDEP TSALDPELVN EVLDVIKELA
RSGTTLVIVT HEIGFAREVA DNVLFMERGR IVEAGPPAVV LDAPSHSRTR AFLSRVL
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