| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3934 |
|---|
| Symbol | |
|---|
| ID | 4096236 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1099660 |
|---|
| End bp | 1100592 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638017228 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_623796 |
|---|
| Protein GI | 107026285 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0254446 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGATC GACGCCAGTT CATCACGGCC GCGCTGGTCG CGGCATCGGG CCTGCCGTGG
CACGCGGCAC GCGCGGCGGC CGCCACCGCC GACCTCGACC CGCGTCAGGC CGGCCGCCTG
CGCGCGAGCC CCGACGACGC GGCCATCCGC GCGGCCAGCG GCTACCACTG GGTGCGCGAC
GGCGCATTCA CGGTCGCGAT CTCGCCGCAC GCGCCGCCCG TGTCGACCTA TGCGACCGAC
GCGCGCACCG TGGTCGGCGC CGATCCCGAC TATGCGCAAC TGGTCGCGGA CGCGCTCGGC
CGCACGCTCG TGCTGCTGCC GATCGCGTGG GCCGACTGGC CGCTCGGGCT GACGTCCGGC
AAGTACGACG CGGTGATCTC GAACGTCGGC GTGACCGAGA AGCGCAAGGA GAAATACGAT
TTCACGACCT ACCGGCTCGG GCTGCACGGC TTCTACGTGC GCACCGCCAG CCCGATCGTG
AAGATCGCGG AGCCGAAGGA CATCGCGGGC CTGCGGATCA TCACCGGCGC CGGCACGAGC
CAGGAGCGCA TCCTGCTCGA ATGGAGCAAG CGCAACGTCG CGCAAGGGCT GAAGCCGGCC
GAACTGCTCT ATTTCGACGA CGATGCGACG GCGCGCGTCG CGCTGCTGTC GGGCCGCGCG
GATGCGGAGC TGAACCCGAA CGCGTCGCTC GCGTACGAGG CCGCGCGCAG CGGCAAGATC
CGCCGCGTCG GCGTCGTCAA TGCAGGCTGG CCGGCGAATG CGGACGTCGC GATCGCGACG
CGCCGCGGCA GCGGACTCGC GCCGGCGCTG ACCCTCGCGA CCAATGCGCT GATCGGCAAC
GGCCGCTATG GGCAGGCGCT GGCACGCTGG GGTTTGCAGA GCGAGGCGAT CGCGCGGGCG
GAGACCAATC CGCCGGGGTT GCCGTCGTTC TGA
|
|---|
| Protein sequence | MTDRRQFITA ALVAASGLPW HAARAAAATA DLDPRQAGRL RASPDDAAIR AASGYHWVRD
GAFTVAISPH APPVSTYATD ARTVVGADPD YAQLVADALG RTLVLLPIAW ADWPLGLTSG
KYDAVISNVG VTEKRKEKYD FTTYRLGLHG FYVRTASPIV KIAEPKDIAG LRIITGAGTS
QERILLEWSK RNVAQGLKPA ELLYFDDDAT ARVALLSGRA DAELNPNASL AYEAARSGKI
RRVGVVNAGW PANADVAIAT RRGSGLAPAL TLATNALIGN GRYGQALARW GLQSEAIARA
ETNPPGLPSF
|
|---|
| |