| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3879 |
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| Symbol | |
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| ID | 4095736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | + |
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| Start bp | 1040005 |
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| End bp | 1041777 |
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| Gene Length | 1773 bp |
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| Protein Length | 590 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638017173 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_623741 |
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| Protein GI | 107026230 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.47914 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCGGC TCGGCCTCAC GTCGAAGCTG TCGGTGCTGT TCGCGTGCAT CGGCGTGATC
GCGGCCGGCA CGACCGGCTA CTACGCGTAT CGCGCCAACC GCGCGATGCT CGTGCAGGAA
GCGCAGCACA GCCTGCTGAT GTCGACGCAA TTGCTCGGGC AGCGCTTCAC CACCGCGCTT
GCCGACGTGG CCGACGATGC GCTCGTGCTC GCGCAGTTGC CGTCGTCCGC GTCCGTCGCC
GGCGGCGACA ACCCGGACGC CGCGCGACGC ATGCGGCTCG AGCAGGTGTA CTACAGCTTC
ATGCGCAATC ATGCGGAATA CCTGCAGATT CGCCTGATCG CGAGCGGGCA TTTCGGGATC
GAACGCATTC GCCTCGATCG CGATGCGCGC GGCATCGTCG TGCTGCCCGA AAGCGCGTTC
CAGGAGAAAG GGCAGTTCTC CTATGTATTC GATACGCTCG CGACGGCGCC CGGCCATATC
TATCTGTCGC CGATCGTGGT CAATCACGAG ACGGGATCGC ATGCGGCGGA AGGGCTGCCG
ATCCTGCGCG TGGGCACGCC GGTGGTCGAC GCGGCCGGCC AGACGGTCGG CGCGCTCGTC
GTCGACGTCG AGCTGTCGCG CGTGTTAGAC CGGCTCGAAC GCGATCTTCC GGACGACTAT
GCGGTCTATC TCGCGAACGA GTGGGGCGAT TTTCTCGTGC ATCCCGATCC GGCGCAGACG
TTCGGCTTCG ATCGCGGCCG GCGCGTCCTG ATGCAGGACC GCTTTGCCGT CACGCGCGCG
CTGTTCGACA GCGCGCGCAC GAACGTGACG CTCAATGGAC TCGCGCAGCC CGACGAAGCA
CCGGGCCAGA TGTTCGCGTT CGTGCGCACG CCGTTCGGGC AGGACGAGGG CAACCGCTTC
GTCGTGCTCG GGATGGCGCG CCCGCTGGCC GACGTGCTCG CGCCGGCCGG CATGCTGGGC
GAACGAATCG TCAGGATGGT GCTCGTATCG AGCGTGCTGG CGGTGATTCT CGCGATCCTG
TTCGCGCGTG CGATCACGCG GCCGTTGCAG ACCCTCGCGC GCGCCGCGAC ACACGTGTTC
GACGACCCGG CCGCCGAACG GCTGCCGGTC GCGCGGGCCG ACGAGATCGG CGTGCTCGCG
CGCTGTTTCG ACAGCATGCG CGTGGAGATC CGCACGCAGA TGGCGATGCT GCGCGCGAAG
CAGCTGGAAC TGACGCACCT CGCCGGTCAC GACCCGCTGA CCGGCCTGCC GAACCGCCTG
CTGTTCATGG AGCATCTCGA GGCCGCGATC CGGCATGCGG CCGCGGTGCG CGAGGGGTTG
GCGGTGATGT TCGTCGATCT CGACCGCTTC AAGCAGATCA ATGACCAGCA CGGACACTCG
GCGGGCGACC GCACGCTCGT CGCGGTCGCG AAGCGGCTGA GCCAGGTGCT GCGCGCCGGC
GACATGGCGG CACGGCTCGG CGGCGACGAA TTCATCGTGC TGATTTCGGA CGTGAGTTCA
CCCGCGGTGA TCGGCGATGT CGCGTCGCGC ATCCAGATCG TGATGGCCGA GGAACTCGAG
TTCGACGAAG GGCGCATGGC CGTCGGCGCG AGCATCGGCG TCAGCGAGTT TCCGGCGGAT
GGCGCGTCGG CCGAGGAGTT GCTCGTCAAG GCGGATGCGG CGATGTATGC GGCGAAGGCG
TCCGCGCAGT GCGTGTGCGT GCGCTATCAG GATCTGGTCC GCGGCGGTAC GCCGGACCAA
ACCGGTCGCG TCGCCTCGGA CGGCACTCGC TGA
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| Protein sequence | MIRLGLTSKL SVLFACIGVI AAGTTGYYAY RANRAMLVQE AQHSLLMSTQ LLGQRFTTAL
ADVADDALVL AQLPSSASVA GGDNPDAARR MRLEQVYYSF MRNHAEYLQI RLIASGHFGI
ERIRLDRDAR GIVVLPESAF QEKGQFSYVF DTLATAPGHI YLSPIVVNHE TGSHAAEGLP
ILRVGTPVVD AAGQTVGALV VDVELSRVLD RLERDLPDDY AVYLANEWGD FLVHPDPAQT
FGFDRGRRVL MQDRFAVTRA LFDSARTNVT LNGLAQPDEA PGQMFAFVRT PFGQDEGNRF
VVLGMARPLA DVLAPAGMLG ERIVRMVLVS SVLAVILAIL FARAITRPLQ TLARAATHVF
DDPAAERLPV ARADEIGVLA RCFDSMRVEI RTQMAMLRAK QLELTHLAGH DPLTGLPNRL
LFMEHLEAAI RHAAAVREGL AVMFVDLDRF KQINDQHGHS AGDRTLVAVA KRLSQVLRAG
DMAARLGGDE FIVLISDVSS PAVIGDVASR IQIVMAEELE FDEGRMAVGA SIGVSEFPAD
GASAEELLVK ADAAMYAAKA SAQCVCVRYQ DLVRGGTPDQ TGRVASDGTR
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