Gene Bcen_3871 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3871 
Symbol 
ID4095410 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1029006 
End bp1031675 
Gene Length2670 bp 
Protein Length889 aa 
Translation table11 
GC content69% 
IMG OID638017166 
Producthypothetical protein 
Protein accessionYP_623734 
Protein GI107026223 
COG category[S] Function unknown 
COG ID[COG0392] Predicted integral membrane protein
[COG2898] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGAACA ACCAGATACG TCGCCGCCCG GCCAGCCCGC GCCGCGACAC GCTATGCACC 
ACCACTGAAC ACGTTATGTC TTCCCGCCAC CCTGGTTCGC CCGGCCGTGC CGAGGCGGTG
ATCGTCCGTG CCCGGGCGCT GATCCGCAAC GAGCGCGTAC TGTCGCCGCT GCTCGCGCTC
GGCATCGGCC TGCTGCTGAT CGTGGTTTTC CAGCATCTGT CGGAATCCGT CGACTATCGG
TCGGTGATTC GCCAGTTGCG TCACATGTCC GTCGGCGAGT GGGGCGCGTC GCTGGCCGCG
ACGGCCCTCA GCTATCTCGC GCTCGTCGCC CGCGATGCGG TCGGCCTGCG TTATGTCGCG
GCCAGGGTGC CGCGCGTCGC GCTGTGGATC GGCGCGATTG CCGGTTCCGC GCTCGGCAAC
GCGACCGGCT TCGGCGCGCT GACGGGCGGC GCGGTGCGTG CTCGCGTGTA CGGCGTGTCG
GGCGTCACGC CCGCCCAGAT CGGCCGGATG ACGGTGTTCA CGAGCGGCAC GCTGGCGCTC
GCGATGGTGT TGATGACGGC GGTCGGCATG GTCTGCGTGC CGGAGGCGCT CGCCGCGATG
CTGCACGTCG CGCCCGGCGT GCTCACGTGG ACGGGCGCGG CACTGCTCGT CGCGCTCGCC
GCGCTGGTCG TGCTGTGCGG CAACACCGCG CGCCCGGTCG TCACGCGCTT CAAATGGCTG
TCGTTCGACG TGCCGGCGCG GCGCGATCTC GTTGCACAGG TCGTCTATGC GGTGCTCGAC
GTCGTTGCCG CGGGCCTGAC GCTGTGGGTG TTGCTGCCGG CGGCTCCCGT CGGCTTCCCG
ACCTTCATCA CCGTTTATGC AGCCGCGTTG CTGCTCGGGA TGATCGGCCA TACGCCGGGC
GGGATCGGCG TGTTCGAAGC GGCGATGGTC TTCACGCTGG GCCGCGAAGT GCCCGCGCAC
GCGATGGTCG CCGCGCTGAT CGCGTATCGC GCGATCTATT TCGGCGTGCC GCTCGTGCTG
TCGGCCGGCC TGCTGGCCGG CTTCGAGGGC CGCGCGCTGC GGCGCCGGCT CGTGACGCGG
CAGGCCGTGC GCGTGTCGCA ACTGGCGCCG GTGTTCCTGA GCCTCGTGAC CTTCGCGGTC
GGCGGGATGC TGGTGATCTC GAGTGCGACG CCCGCGTTCT GGCACCGGAT CGCGATCCTG
CGCCACATCG TGCCGCTGTG GGTGCTCGAA GGCTCGCAGG TGATCTGCAG CGTGCTCGGC
GTCGCGCTGC TGTTCGTCGC GCGCGGGCTG CTGCGCCGGC TCGACGGCGC GTGGTGGATG
ACGTTCGCCT TGACGCTCGC GAGCCTCGCG CTGTCGCTGG CCAAGGGCCT CGCATTCGTC
GAGGCAGGCG TGCTCGGCAC GCTGCTCGTG CTGCTGCTCG TCAGCCGCCG CCGGTTCAAC
CGTCATTCGT CGCTGCTTGC CGAGCGCTTT ACCGTGAGCT GGTTCGTGTC GGTGGCGATG
GTGCTGATGC TGGCCGTGTG GGTGCTGTTC TTCGCGTTCC GCGACGTGCC TTACACGCGC
GATCTGTGGT CGCATTTCTC GTTCGATGCG CGCGCGCCGC GAGCGCTGCG CGCGACGCTC
GCCGCCGGCG TATTCGTCGC GCTGTTCGCG CTGTGGCAAT TGCTGCGCCC GGCGCCCGGT
CGTTTCGTGA AGCCCGCGCA GCAGGACCTC ATCGACGCGG AGCAGATCAT CCGCGCGCAG
GAATGCAGCG ACGCGGGCCT CGCGCTGATG GGCGACAAGT CGTTCCTGTT TTCCGAATCG
CGCCGTGCGT TCCTGATGTA CGCGAAGAAC GGCCGCACGT GGGCCGCGCT GCACGACCCG
GTCGGGCCGC GTGAAGAGTG GCCGGCGCTG ATCAGCAAGT TCATCGCGCT TGCGCACGCG
CACAGCGGCC GCGCGGCGTT CTACCAGGTG CGCGCGAACG CGTTGCCGCT GTATCTCGAC
GCGGGGCTCA CGCTGATGAA GCTCGGCGAG GAAGCGCATA TCGCGCTCGA CCAGTTCGAC
CTGAAGGGTT CGAACCGTTC GCACCTGCGC TACGCGCTGC GTCGCGGCGA CAAGGATGCG
CTGACGGTCG AGGTGATCGC GCCGGGCGAC GTGCCCGCCG CGCTGCCGGC GCTGCGCGAC
ATCTCCGACG GCTGGCTCGA CAGCCGCGAT GCGCGCGAGA AAAGTTTCTC GGTGGCCGCG
TTCCACGACG GCTATCTGTC GACGCAGTCG GTGATGCTGG TGCGGCAGGC CGACAAGCCG
ATCGCGTTCG TCACGTTCAT GACGACCGAC CTCAACACCG AGGCGACGGT CGGCGTGATG
CGCCATCTGC CGGACGCATC GCCGTATGCG ATGGAGTATC TGTTTACGCA GCTCGCGCTG
CATCTGAAGG AAGCGGGGTT CCGCAAGCTG AGCCTGGGCA TCGCGCCGTT CTCGGGAATG
GGGGCGGCGA AGATGCCGTC GCCGTTCCAC CGGCTCGGCC TGATGGTCTG GCGCTTCGGC
GGCCGCTTCT ACAACTTCCG CGGCTTGCGC GCTTTCAAGA GCAAGTTCGA ACCGCACTGG
GAGCCGCGTT ATCTCGCGGC CTCGGGCTCG GTCGGCGTGT TCGTCACGCT GGCGGATCTG
TCATTGCTGG CTGGAGGTCG GCGTTCATGA
 
Protein sequence
MQNNQIRRRP ASPRRDTLCT TTEHVMSSRH PGSPGRAEAV IVRARALIRN ERVLSPLLAL 
GIGLLLIVVF QHLSESVDYR SVIRQLRHMS VGEWGASLAA TALSYLALVA RDAVGLRYVA
ARVPRVALWI GAIAGSALGN ATGFGALTGG AVRARVYGVS GVTPAQIGRM TVFTSGTLAL
AMVLMTAVGM VCVPEALAAM LHVAPGVLTW TGAALLVALA ALVVLCGNTA RPVVTRFKWL
SFDVPARRDL VAQVVYAVLD VVAAGLTLWV LLPAAPVGFP TFITVYAAAL LLGMIGHTPG
GIGVFEAAMV FTLGREVPAH AMVAALIAYR AIYFGVPLVL SAGLLAGFEG RALRRRLVTR
QAVRVSQLAP VFLSLVTFAV GGMLVISSAT PAFWHRIAIL RHIVPLWVLE GSQVICSVLG
VALLFVARGL LRRLDGAWWM TFALTLASLA LSLAKGLAFV EAGVLGTLLV LLLVSRRRFN
RHSSLLAERF TVSWFVSVAM VLMLAVWVLF FAFRDVPYTR DLWSHFSFDA RAPRALRATL
AAGVFVALFA LWQLLRPAPG RFVKPAQQDL IDAEQIIRAQ ECSDAGLALM GDKSFLFSES
RRAFLMYAKN GRTWAALHDP VGPREEWPAL ISKFIALAHA HSGRAAFYQV RANALPLYLD
AGLTLMKLGE EAHIALDQFD LKGSNRSHLR YALRRGDKDA LTVEVIAPGD VPAALPALRD
ISDGWLDSRD AREKSFSVAA FHDGYLSTQS VMLVRQADKP IAFVTFMTTD LNTEATVGVM
RHLPDASPYA MEYLFTQLAL HLKEAGFRKL SLGIAPFSGM GAAKMPSPFH RLGLMVWRFG
GRFYNFRGLR AFKSKFEPHW EPRYLAASGS VGVFVTLADL SLLAGGRRS