Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3838 |
Symbol | |
ID | 4095514 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 992791 |
End bp | 994347 |
Gene Length | 1557 bp |
Protein Length | 518 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638017135 |
Product | 3-hydroxy-acyl-CoA dehydrogenase |
Protein accession | YP_623703 |
Protein GI | 107026192 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | [TIGR02279] 3-hydroxyacyl-CoA dehydrogenase PaaC |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.331039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTTT CCTCTGCACA TTCGGTGAAC TCGGGCGCGC TCGCGCCGTC GGCCGTCGTC GGCGTGATCG GCGCCGGCGC GATGGGCGCG GGCATTGCGC AGGTCGCGGC GGCGGCCGGC CATGCGGTGC TGCTGTACGA CCTGAACGAA GCAGCCTGCG ACAAGGCGCT GGCCGGCATC CGCGCGCAGT TCGCGCGGCT GGCGGAGAAG GGCCGGCTCG AACCGGCGCA GGCCGACGCA GCCGGCAACC GGCTCCGCGC GGTGCGCGCG CTGGCCGATT TCGCGGGCGC CGCGCTGATC GTCGAAGCGG CGGCCGAACG GCTCGACGTG AAGCGCGAGA TCTTCGCGAC CCTCGAACGT CATGTCGACG ACGCGTGCGT GCTGGCGACC AACACGTCGT CGATCTCGAT CACGTCGATC GCGGCCGGGC TGCGCGTGCC GCAGCGCGTC GCCGGCCTGC ATTTCTTCAA TCCGGCGCCG CTGATGGCGC TCGTCGAGGT GGTCAGCGGG CTCGCGACCG CGCCCGAGGT CGCCGGGATG CTGCATGCGA CCGCCGCCGC GTGGGGCAAG CAACCGGTGA TGGCGAAATC GACGCCGGGC TTCATCGTGA ACCGCGTCGC ACGGCCGTAT TACGCGGAGG CGCTACGCGT ACTGAACGAG CAGGGCGGCA CGCCGGCCAC GATCGACGCG GTGATGCGCG AAGCTGGCGG CTTCCGGATG GGGCCGTTCG AGCTGATGGA CCTGATCGGC CACGACGTGA ATTTCGCGGT GACCGAGTCG GTGTTCCGCG CGTACTTCAA CGACCCGCGC TACACGCCGT CGCTGATCCA GCAGGAACTC GTGAACGCGG GCTTCCTCGG GCGCAAGTCC GGGCGCGGCT TCTATTCGTA TGCGGACGGC GCGACGCCGC CCGCGCCCGA TCTCGAGCCG CCGCGCGCCG CGCCGGCCGA CGTCGTGCTG TTTGCGCAGG AAGGCCCGGC CGCCGCGCTG CACACGCGCC TGGCCGAACG GATCGAAGGC GCGCGGCGCA ACGGCGCGCA TGCGGACGAA CTGCTCGCCG TGGCCGGCCG CGCGTCGATC GCGCTGACCG ATGGCCGCAC CGCGACCGCG CGCGCCGCCC AAACGGGCGT GGCCGACCTC GTGCTCGTCG ACCTGGCGCG CGATTACGCG CAGGCCGGGC TCGTCGCGCT GACGCGTGCG CTCCAGTGCA ACGACGCCGC GTATGCGGAC GCGGTCGGCC TGTTCCAGCA GGCGGGCTTT CGCGTGGTCG GCATCGCGGA CGTGCCGGGA ATGGTCGCGA TGCGCACCGT CGCGATGCTC GCGAACGAGG CGGCCGACAC GGTCAACCAG GGCGTGTGCT CGCCGGCCGA TCTCGATCTC GCGATGGAGA AGGGCGTGAA CTATCCGTGC GGCCCGCTCG CGTGGGCCGA TGCGATCGGG ATCGGCCGCG TGCATCGCGT GCTGTCGAAC CTGGCGGCGA GCTACGGCGA GGACCGCTAT CGCGTGTCGC CGCGCGTCGC CGCGCTGCAC GCGGCCGGCC GCACGTTCCG GTCGTAG
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Protein sequence | MAVSSAHSVN SGALAPSAVV GVIGAGAMGA GIAQVAAAAG HAVLLYDLNE AACDKALAGI RAQFARLAEK GRLEPAQADA AGNRLRAVRA LADFAGAALI VEAAAERLDV KREIFATLER HVDDACVLAT NTSSISITSI AAGLRVPQRV AGLHFFNPAP LMALVEVVSG LATAPEVAGM LHATAAAWGK QPVMAKSTPG FIVNRVARPY YAEALRVLNE QGGTPATIDA VMREAGGFRM GPFELMDLIG HDVNFAVTES VFRAYFNDPR YTPSLIQQEL VNAGFLGRKS GRGFYSYADG ATPPAPDLEP PRAAPADVVL FAQEGPAAAL HTRLAERIEG ARRNGAHADE LLAVAGRASI ALTDGRTATA RAAQTGVADL VLVDLARDYA QAGLVALTRA LQCNDAAYAD AVGLFQQAGF RVVGIADVPG MVAMRTVAML ANEAADTVNQ GVCSPADLDL AMEKGVNYPC GPLAWADAIG IGRVHRVLSN LAASYGEDRY RVSPRVAALH AAGRTFRS
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