Gene Bcen_3832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3832 
Symbol 
ID4096289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp985156 
End bp986187 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content69% 
IMG OID638017129 
ProductTRAP dicarboxylate transporter, DctP subunit 
Protein accessionYP_623697 
Protein GI107026186 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID[TIGR00787] tripartite ATP-independent periplasmic transporter solute receptor, DctP family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATACCT ACACCCGGCG GCGCTTTCTG CAGACGGTGT CCGCCGCCAC GCTCGCGGCC 
GCGGGCGGCT TGCCGGAAAG CGTGCGCGCG CAGCAGCCGG TCGTCACGCT GCGCTGCTCG 
TCGTCGATGC CGGCCGACCA GAACGCCGCG CACTACGTGT GGTACGAGCG TCTCGCCGCG 
AACCTGAAGG CGAGCGTGGG CGACGCGATC CGGGTCGACT ACTTTCCGAA CAGCCAGCTC 
GGCAAGGAAA GCGACGTCGT GCAGCAGGTC AAGATCGGCG CGATCGACAT GATGATCGCG 
GGCTCGTCGA TCTGGGCCAC GGTCGCGCCG GAGCTCGGGA TGCTCGATCT CGGCTACCTG 
TTCGACAGCT ACGCGCACGT CGCGAAGGCG CTCGACGGCT CGGTCGGCAC GAGCCTGAAC 
GCGCTGCTGC AAAAGCGCGC GGGATGCTCG GTGCTGACCT GGGGCTCGCA TTTCGGCGGG 
CGCTGCGTGT TCACGAAGCA GCCGGTGACG GCGCTGTCCG GCCTGAAGGG GACGAAGCTG 
CGCGTGCTGC CGACGCCCGC GTTCATGGAT ACCTTCAAGG CGATGGGCGC GGTGCCGACG 
CCGATTCCGT TCGGCGAGCT GTACATGGCC GTGCAGACGG GCGTCGTCGA CGGTCTCGAA 
CACGATCCCG CCACGGTGCT CGCGAGCCGC TTCGACGAGA TCGTGAAGTC GTGCTGGCAA 
TCGCGCCACG TGTTCGCGGC GATGACCGTC GTGATGGGGC GGCGTGCGCT CGACCGGATT 
CCGGCCAATC TGCGGCCCGC CTTCGACCGC GCGGTGGCCG ACGCGACCGT GCAGCAGCGC 
GCGATTGCCG CGCAGAAGGC CGCGCAGGCG GAGCAGGCGC TGAAGCAGCG CGGCATGGCG 
TTTTACCCGC TGGCCGATGG CGAGCGCGCG GCGCTGCGGC AGACGATGCA AGACCGCCTG 
TATGCGGCGT TCGCGAAGCA GTATCCGGCC ACCGCGCCGC TGTTTCCGGC GATTGCCGCC 
GCGCGGGGGT GA
 
Protein sequence
MNTYTRRRFL QTVSAATLAA AGGLPESVRA QQPVVTLRCS SSMPADQNAA HYVWYERLAA 
NLKASVGDAI RVDYFPNSQL GKESDVVQQV KIGAIDMMIA GSSIWATVAP ELGMLDLGYL 
FDSYAHVAKA LDGSVGTSLN ALLQKRAGCS VLTWGSHFGG RCVFTKQPVT ALSGLKGTKL 
RVLPTPAFMD TFKAMGAVPT PIPFGELYMA VQTGVVDGLE HDPATVLASR FDEIVKSCWQ 
SRHVFAAMTV VMGRRALDRI PANLRPAFDR AVADATVQQR AIAAQKAAQA EQALKQRGMA 
FYPLADGERA ALRQTMQDRL YAAFAKQYPA TAPLFPAIAA ARG