Gene Bcen_3820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3820 
Symbol 
ID4096277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp971542 
End bp972867 
Gene Length1326 bp 
Protein Length441 aa 
Translation table11 
GC content68% 
IMG OID638017117 
Productmajor facilitator transporter 
Protein accessionYP_623685 
Protein GI107026174 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAACGT CCGCTCTTCC GTTCGCCGGC ACGCCGGTCG ATGCCCGCGC CGCCGCGAAG 
AAGCGCCGGC TGATCGCGGC CGCGGCCGTC GGCAACGCGC TCGAGTTCTA CGACTTCACG
GTCTACAGCT TCTTCGCGCT CCTGATCGGC AAGCTGTTCT TTCCCGTGCA TTCGTCGTTC
GGGCAGTTGA TGCTCGCGGT CGCGAGCTTC GGGGTCGGCT TCGTCACGCG TCCGCTCGGC
GGGCTCGTGA TCGGGATGTA TGCGGACCGC GCCGGCCGCA AGAAGGCGAT GATCCTCACG
CTGCTGCTGA TGGCGCTCGG CACTGCGACG ATCGCGGTCG CGCCGACCTT CGCGCAGATC
GGCATCGCCG CGCCGCTGCT GCTCGTGCTC GCACGGCTGC TGCAGGGGTT CGCGTCGGGC
GGCGAAGTCG GCGCATCGAC GACGCTGCCG CTCGAACAGG CGCCGCAGCA TCGTCGCGGC
TTCTATGCGT CGTTCCAGTT CTCGAGCCAG GGGCTCGCCG CGCTCGCGGG CGCGCTCACC
GGCGTGGCGC TGACGTCGAC GCTGAGTGCC GCGCAACTCG AAAACTGGGG CTGGCGCGTG
CCGTTCATCA TCGGCACGCT GTTCGTGCCG CTCGGCTACT GGCTGCGCCG CACCGTCGAG
GAAGTGCCTG CGGCGGTGCC CGCGCCCGCC GCCGCGCACG ACGAACCGGT TGCGTCGCTG
CCGCTCGCCG ACGTGCTGCG CCATCACGGC AAGGCCGTGT TCGCGGGCCT CGGCGTGACG
ATCGGCGGCA CGTCGATCCA TTACATCATC GTGTTCTACA TGGCGATCTA CGGCGTGCAG
GTGCTGCACC TGCCGACCTG GCTGTCGATG ACGGCCGGCT GCGTCGCCGG GGCGATCCTG
ATGCTCGTGA CGCCGATCGG CGGCCACCTG TCCGACGTGT TCGGGCGCAA CCGGATCGTC
TGGTGGACGC GCATCGTGCT GATGGCCGCG ATCTATCCGG CGTTCATCGC GCTGAACCGC
TGGCCGGGCG CCGTGTCGCT GCTGTCGATC ATCGCCGCGC TGTCGATCGT GCATTCGATC
AACATCGGTG CGACCGGCGC GATGCTTGGC GAGTTGTTTC CGCGGGCCGT GCGTGCGACC
GGCGGTGCGC TCGTGTATAG CGTCGGCGTC GCGATCTTCG GCGGCTTCGC GCAGTTCTTC
GTCACGTGGT TGATCGCGGC AACCGGGAAT CCGAATGCGC CGGCATGGTA TGCGATCGGC
TGTGGTGCGA TGACGTTGCT CGCGATTCGC TGCATGGAGG AAAAGGCGGG GAAGGCGCTG
GACTGA
 
Protein sequence
METSALPFAG TPVDARAAAK KRRLIAAAAV GNALEFYDFT VYSFFALLIG KLFFPVHSSF 
GQLMLAVASF GVGFVTRPLG GLVIGMYADR AGRKKAMILT LLLMALGTAT IAVAPTFAQI
GIAAPLLLVL ARLLQGFASG GEVGASTTLP LEQAPQHRRG FYASFQFSSQ GLAALAGALT
GVALTSTLSA AQLENWGWRV PFIIGTLFVP LGYWLRRTVE EVPAAVPAPA AAHDEPVASL
PLADVLRHHG KAVFAGLGVT IGGTSIHYII VFYMAIYGVQ VLHLPTWLSM TAGCVAGAIL
MLVTPIGGHL SDVFGRNRIV WWTRIVLMAA IYPAFIALNR WPGAVSLLSI IAALSIVHSI
NIGATGAMLG ELFPRAVRAT GGALVYSVGV AIFGGFAQFF VTWLIAATGN PNAPAWYAIG
CGAMTLLAIR CMEEKAGKAL D