Gene Bcen_3794 details

Gene Information

• Locus tag: Bcen_3794
• ID: 4094927
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008061
• Strand: +
• Start bp: 939630
• End bp: 940283
• Gene Length: 654 bp
• Protein Length: 217 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 638017091
• Product: putative threonine efflux protein-like
• Protein accession: YP_623659
• Protein GI: 107026148
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG1280] Putative threonine efflux protein

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAGAAT CGCAGGTAAA AACGGGGCTT CGATCACGAC GACCGGGAGC CCTCGTGCCG 
CTTCACGACT ATCTGCCGCT GCTGCTGTTC GTGATCGTGT CCACCGTGAC GCCGGGTGGC 
GCGACGACGC TGGCGACCGC ATCGGGCGCC CATTTCGGCT ATCGGCGTTC GCTGCCGCTG 
ATGGCAGGCA TCGCCGCGGG CCTGGCGTCG ATGGCGGCGG CGGCCGCCGC CGGGCTCGGC 
AGTGTGCTGC TCGCGCTGCC CGCGTTGCAG CTCGTGATGA AGGCGGTCGG CTCGGCGTAC 
CTGATATGGC TGGCGTTACG CATCGGTCGT GGCGGCAAGC CGCGCCTCGA TGTCGACGTG 
CACCGGCCGC AAGGGTTCGT CAGCGGCGTG TGGATGCTGT GGCACAACCC GAAAGGCTGG 
GCGATGACGC TCGGTGCGGC CGCGTCGTTT GCGGCGCTCG CGTCGGGGCC GGCGCGGCTC 
GGCGTGCTGC TCGGTTTTGC ATTCGGCGTG GCGGCGATGG CGTCGTTGTC GCTGTGGTGT 
TTCGCCGGGC TGCTGTTCGC ACGCGTGTTG CGCACGGAGC GGCAGTGGCG CTGCCTGAAT 
GCGGGGCTCG GCGTGCTGCC GGTGGCGTCG ATCGTGCCGA TGTGGCTGCC GTAG 

 

Protein sequence

MQESQVKTGL RSRRPGALVP LHDYLPLLLF VIVSTVTPGG ATTLATASGA HFGYRRSLPL 
MAGIAAGLAS MAAAAAAGLG SVLLALPALQ LVMKAVGSAY LIWLALRIGR GGKPRLDVDV 
HRPQGFVSGV WMLWHNPKGW AMTLGAAASF AALASGPARL GVLLGFAFGV AAMASLSLWC 
FAGLLFARVL RTERQWRCLN AGLGVLPVAS IVPMWLP