Gene Bcen_3778 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3778 
Symbol 
ID4094911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp917048 
End bp917611 
Gene Length564 bp 
Protein Length187 aa 
Translation table11 
GC content69% 
IMG OID638017075 
ProductD-alanyl-D-alanine dipeptidase 
Protein accessionYP_623643 
Protein GI107026132 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCTC ACCGCCTCGT CGAAATCACG CCCGCCACGC ATCGCGTGGA GATCGATCTC 
GTCTACGCGA CCGAGCGCAA CCTGACCGGC AAGCCGATCT ACCGCCACGC GCACTGTCTG
CTGCTCGAGC CGGCCGAAAC CGCGCTGCGC CGGGCGGTGG ACGTCGCCGC GCAAGCCGGC
TTCACGCTGC GCATCTACGA CGCGTACCGG CCGCCGCAGG CGCAGCAGGT GCTGTGGGAT
TTCCTGCCCG ACCCGAACTT CGTCGCCGAT CTCGGCCGCG GGTCGAACCA CAGCCGCGGC
ACCGCGCTCG ACCTGACGCT CGTCGGCGCG AACGGCGAGC CGCTCGACAT GGGCACCGGC
TTCGACGAGA TGGTGGCCGC GTCGGGCCAC TTTCACGCGG AGTTGCCCGA GCACGTGCAA
CGCAACCGGC TGCTGCTGCT CGGAGTGATG CACGCAGCCG GCTTCGCGCA TATCGACAGC
GAGTGGTGGC ACTACGAGCT GCCTGGCTCG CACGCGCTGC CGCAGATCGA CAACGCGGCG
AGCGGCCCGT GGCGCCTGAT GTAA
 
Protein sequence
MNPHRLVEIT PATHRVEIDL VYATERNLTG KPIYRHAHCL LLEPAETALR RAVDVAAQAG 
FTLRIYDAYR PPQAQQVLWD FLPDPNFVAD LGRGSNHSRG TALDLTLVGA NGEPLDMGTG
FDEMVAASGH FHAELPEHVQ RNRLLLLGVM HAAGFAHIDS EWWHYELPGS HALPQIDNAA
SGPWRLM