Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3750 |
Symbol | |
ID | 4095097 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 884773 |
End bp | 885978 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638017047 |
Product | secretion protein HlyD |
Protein accession | YP_623615 |
Protein GI | 107026104 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACTG AGATCGATAT TAAGTCGCCG AAACGGCTGC CCAACCTCAA GCTCGTCGCC ACGATCACCG CGCTGATCGC GGTCGGCATC GTGGCGACCG GCATCGTCGG CCGCGCGCAC GCGAAACAGG AAATGGCGAC CTGGTCCGCC GAACAAGCGG TGCCGACCGT GGTCGCGTAC ACGCCGTCGA CCGGCGGCGA CGGCGCGACG CTCGTGCTGC CCGGCCACCT GTCCGCATTC GAGAGCGCGC CGATCCACGC GCAGGTGTCG GGCTACCTGC ATGCGTGGTA CACCGACATC GGCGCGCACG TGAAGTCGGG GCAACTGCTC GGGCTGATCG ATACGCCCGA GCTCGACCAG CAACTGCAGC AGGCGCGCGC CGACCTGCAG AGCTCGCTCG CCAACGAGAA GCTCGCCGCG TCCACGGCCG CGCGCTGGAC CCGGATGCTC GCGCAGGATT CGGTGTCGCA GCAGGAAACC GACGAGAAGA CCAGCGACCT CGCGGCCAAG CAGGCGATCG TCGCGGCCAA CGAGGCCAAC GTGCGACGCC TCGACGCGCT CGAGGCGTTC AAGCGCATCG TCGCGCCGTT CGACGGCGTC GTCACCGCGC GCAAGACCGA CATCGGCCAG TTGATCTCGG CCGGCGGCGG CGCCGGCCCG GAATTGTTTG CGGTGTCCGA CGTCCACCGG ATGCGCGTCT ACGTGAGCGT GCCGCAGAAC GAGGCCGCCG CGATCCGGCC CGGCATGACG GCCACGCTGA CCGTGCCGGA GCATCCGGGC GAGACCTTCC GTGCGACGCT CGCCGACACC GACGACTCGA TCGCCGACTC GACCGGCACG CTGCTCGTGC AGTTGATGGT CGACAACTCC GCAGGCAAGC TGATTCCCGG CGAATACACC GAGGTGCATT TCGCGCTGCC GGCCGGCAGC ACCCACGCGC TGACGATTCC GGCCAGCTCG TTGATCTTCC GGCAGGCCGG CCTGCAGGTC GCCGTGGTCG GCAAGGACGA TCGCGCGATC TTCAAGCCTG TGACGATCGC GACCGATCTC GGCACGCACG TACAGATCGC GACCGGCCTC GCGCCGGACG ACCGCGTGAT CGACAATCCG CCCGATTCGC TCGCCGATGG CGACCCGGTC AGGCTCGCGG CGCCGGCCCG CACCGTCGCA TCGGTCGCGC GCGATACGGA GCGTGCGCAT GGCTAA
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Protein sequence | MSTEIDIKSP KRLPNLKLVA TITALIAVGI VATGIVGRAH AKQEMATWSA EQAVPTVVAY TPSTGGDGAT LVLPGHLSAF ESAPIHAQVS GYLHAWYTDI GAHVKSGQLL GLIDTPELDQ QLQQARADLQ SSLANEKLAA STAARWTRML AQDSVSQQET DEKTSDLAAK QAIVAANEAN VRRLDALEAF KRIVAPFDGV VTARKTDIGQ LISAGGGAGP ELFAVSDVHR MRVYVSVPQN EAAAIRPGMT ATLTVPEHPG ETFRATLADT DDSIADSTGT LLVQLMVDNS AGKLIPGEYT EVHFALPAGS THALTIPASS LIFRQAGLQV AVVGKDDRAI FKPVTIATDL GTHVQIATGL APDDRVIDNP PDSLADGDPV RLAAPARTVA SVARDTERAH G
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