| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3729 |
|---|
| Symbol | |
|---|
| ID | 4095057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 861041 |
|---|
| End bp | 862456 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638017026 |
|---|
| Product | sugar transporter |
|---|
| Protein accession | YP_623594 |
|---|
| Protein GI | 107026083 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00879] MFS transporter, sugar porter (SP) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCTG ATTCCGCCCT TCCCGACACA CCCGCGGCCC GCCCCCGGCC CACCCCGTCC
GCCTACATGC GCACCGTCGC ATCGATCGCG GCGATCGCCG GCGGGCTCTA CGGATACGAC
ACCGGCATCA TTTCTGGCGC CCTGCCCCTC ATCGCGCGAG ACTTCGGCCT CGACTACCGC
GCACAGGAGC TCGTCGCCGC GGCGATCCTG CTCGGCGCGG TGATCGGTGC GCTGGCCGGC
ACCCGCATGT CGGCCGCATT CGGACGCCGC AAGACCATTA CGATCGTCTC GGCGATCTAT
GCGGCCGGCG TGCTGGCTGC CGCCCTCTCG CCCGACGCGT GGTCCCTTGC CGCTTCCCGG
CTCGTGCTCG GATTCGCGGT CGGCGGCTCG ACGCAGATCG TGCCGACCTA CATCGCGGAA
CTCGCGGAGC CGGACAAGCG CGGCCGCCTG GTGACCTACT TCAACGTCTC GATCGGCATC
GGCATCCTGC TCGCGGCCCT GATCGGCGTC GCGGGTAACG ACCTGTTTTC CTGGCGCGCG
ATGATCGGTA TCGCGGTCAT CCCGTCGGTC ATCCTGATGG TTGGCATGAC CCGACTGCCG
CGCAGCCCGC GCTGGCTCGT CGAGCAGGAT CGCATCGCCG ACGCGCATGG CGAGTTGTCG
AAGGTGCGGG AATCCCAAGC GGCCGTCCGA CACGAGATTG CCGATATTCG GGACGTGGTC
GAGCGGCAGC AGGACGGCGC GACATCGGGG TGGCGCACGA TGCGCGAGCC CTGGGTACGC
CCCGCTCTCG TTGCCGGCCT CGGCGTCGCC GCGTTCACCC AGCTCAGCGG CATCGAGATG
ATGATCTATT ACACGCCGAC GTTCCTTCGC GACGCGGGGT TCGGCGCGTC GGCATCGCTC
TGGGCCGCAC TCGGCGTCGC CGTCACCTAT CTCGTGATGA CCTTCATCGG CAAGCTGACC
GTCGACCATG TCGGCCGCCG CACGCTCAGC CTCGCGACGC TGCCCGTCGC GGCAGCCAGC
CTCGTGCTGC TTGGCTGCCT GCTGCGGGGC GACTTCGTTT TGCCCATGCA GCAACTGTGG
ATCGTCATCT GCCTGATCGC GTTCATGGTG TTCAACGCCG GCGGTATCCA GGTCATCGGC
TGGCTGACGG GCGCGGAAAT CTACCCCGTC GCGATTCGCA ACCAGGCCAC CGGCGCGCAC
GCCGCAATGC TATGGGGCTC GAACCTCTTG CTGACCGGCA CTGCACTGAC CGTGACCAAA
TGGCTCGGTG TCGGCGGTGC GATGTGGGCG TACGCGTGTC TCAACGCACT CGCATGGGTA
TTTATCTATT CGATGGTGCC GGAAACGCGC GGTCGCAGCC TCGAGGACAT CGAACGCGCA
TTGAAGCGCG GAACGTTCGG GCCGCGCCAT TCATGA
|
|---|
| Protein sequence | MASDSALPDT PAARPRPTPS AYMRTVASIA AIAGGLYGYD TGIISGALPL IARDFGLDYR
AQELVAAAIL LGAVIGALAG TRMSAAFGRR KTITIVSAIY AAGVLAAALS PDAWSLAASR
LVLGFAVGGS TQIVPTYIAE LAEPDKRGRL VTYFNVSIGI GILLAALIGV AGNDLFSWRA
MIGIAVIPSV ILMVGMTRLP RSPRWLVEQD RIADAHGELS KVRESQAAVR HEIADIRDVV
ERQQDGATSG WRTMREPWVR PALVAGLGVA AFTQLSGIEM MIYYTPTFLR DAGFGASASL
WAALGVAVTY LVMTFIGKLT VDHVGRRTLS LATLPVAAAS LVLLGCLLRG DFVLPMQQLW
IVICLIAFMV FNAGGIQVIG WLTGAEIYPV AIRNQATGAH AAMLWGSNLL LTGTALTVTK
WLGVGGAMWA YACLNALAWV FIYSMVPETR GRSLEDIERA LKRGTFGPRH S
|
|---|
| |