| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3728 |
|---|
| Symbol | |
|---|
| ID | 4095056 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 860257 |
|---|
| End bp | 860985 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638017025 |
|---|
| Product | HAD family hydrolase |
|---|
| Protein accession | YP_623593 |
|---|
| Protein GI | 107026082 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
|---|
| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAC TTACTGCCAC ACGTCGACTT TCGGATCATG CGCTGATCAG CGATTGCGAC
GGCGTGCTCG TCGATAGCGA AGCCGTCGCC GAACGCATCG TCGTGACTCG CCTCGAGCAC
CTCTGGGGGC TCGCCGGCCT TCGCGACGTC ATACGTCCCC TGCTCGGCAT GCGAGCCGAG
CAATTGCTGC GCACGGTCGC GACCATCGTC GACCGGCCGC TCGACGACGA CACGGTCGAG
GCGATTCGCG CGGACATCCA CGCAAACGCG GTGAATGCGC CGGCCATCGA CGGCGTGCGC
GACGCGTTCG CCGCCATCCC GCTCGTCAAG GCGTGCGCCA GCAACAGCGA TCTTGCCTAT
GTGCGCAGCG TGGTCGACCG GATCGGTCTG GCCGACCTGT TCGGCGAACG CTTGTTCACG
GCCGACCAGG TGCCCTCGCC GAAGCCCGCG CCCGACGTCT ATCTGGCCGC CGCCCGTCGC
ATGCATGTGG CGCCCGAACG GTGCATCGTC GTCGAAGACA GCGCGACGGG TACGGCCGCC
GCGATGGCCG CCGGCATGAC CGTACTCGGC TTCGTGGGCG CCGCGCACGC GGCACGAACG
CAGACGGACA AGCTGCACGC CGCAGGCGCG TCCGTCGTCT TCGACGACAT GGCCGCGCTG
CCGTCGCTCG TCGAGCGCTG GCTGCGACAC ATGCAGGACA CGACGCCCGC TTGGCGCGTA
CGCGCCTGA
|
|---|
| Protein sequence | MNELTATRRL SDHALISDCD GVLVDSEAVA ERIVVTRLEH LWGLAGLRDV IRPLLGMRAE
QLLRTVATIV DRPLDDDTVE AIRADIHANA VNAPAIDGVR DAFAAIPLVK ACASNSDLAY
VRSVVDRIGL ADLFGERLFT ADQVPSPKPA PDVYLAAARR MHVAPERCIV VEDSATGTAA
AMAAGMTVLG FVGAAHAART QTDKLHAAGA SVVFDDMAAL PSLVERWLRH MQDTTPAWRV
RA
|
|---|
| |