Gene Bcen_3641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3641 
Symbol 
ID4095223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp767052 
End bp767660 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content67% 
IMG OID638016938 
Productautoinducer synthesis protein 
Protein accessionYP_623506 
Protein GI107025995 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism
[T] Signal transduction mechanisms 
COG ID[COG3916] N-acyl-L-homoserine lactone synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000011065 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACCT TCGTTCACGA GGAAGGGCGG TTGCCACACG AACTCGCGGC GGATCTCGGG 
CGCTATCGGC GCCGTGTGTT CGTCGAACAG CTCGGTTGGG CGCTCCCGTC GGCGAACGAA
AGTTTCGAGC GTGACCAGTT CGATCGCGAC GATACCGTGT ACGTGTTCGC GCGAAACGCC
GACGGTGACA TGTGCGGATG TGCGCGCCTG CTGCCGACGA CGCGCCCGTA TCTGCTGAAG
TCGCTGTTCG CCGACCTGGT CGCCGAGGAC ATGCCGCTGC CGCAATCGGC CGCCGTCTGG
GAGTTGTCCC GATTCGCGGC GACCGACGAC GAAGGCGGCT CCGGCAACGC GGAGTGGGCC
GTGCGTCCGA TGCTCGCGGC CGTCGTCGAG TGCGCGGCGC AGCTCGGCGC GCGGCAGCTG
ATCGGCGTGA CGTTCGCGAG CATGGAGCGG CTGTTCCGCC GGATCGGCAT ACACGCGCAC
CGCGCAGGCC CGCCGAAGCA GGTAGACGGG CGTCTGGTGG TCGCGTGCTG GATCGACATC
GATCCGCAAA CGTTTGCTGC GCTAGGAATA GAGCCGGGGC AGACTACCCG GCAAGCTATC
GCCGCCTGA
 
Protein sequence
MQTFVHEEGR LPHELAADLG RYRRRVFVEQ LGWALPSANE SFERDQFDRD DTVYVFARNA 
DGDMCGCARL LPTTRPYLLK SLFADLVAED MPLPQSAAVW ELSRFAATDD EGGSGNAEWA
VRPMLAAVVE CAAQLGARQL IGVTFASMER LFRRIGIHAH RAGPPKQVDG RLVVACWIDI
DPQTFAALGI EPGQTTRQAI AA