Gene Bcen_3623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3623 
Symbol 
ID4095301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp752593 
End bp754104 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content72% 
IMG OID638016920 
ProductRND efflux system, outer membrane lipoprotein, NodT 
Protein accessionYP_623488 
Protein GI107025977 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID[TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.392647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCG CTTTCCGTCT TTCCGCGCTC GCGATGTCGG TGACGCTCGC CGCATGCGCG 
GTGGGCCCCG ATTTCAAACG GCCCGATACC GCCACGGCCG CCCGGTTCGC GCGCGATGTT
CGTCCGGCCA CGCAGCGTGA CGCGGCGCCG GCCGATACAC GAACCGACAC GTCGCCCGAC
GCCGATGCCG CCTTCTGGCG CGGGTTCGGC GATCCGACGC TGACACGGTT GATCGATGCG
GCGCTCGCCG CGAACCAGGA CTTGCAGGTC GCCGTATCGC GCTACGACGC GTCGAATGCG
CTGCTGTCGC AGGCCACGTT CGACCGCTAT CCGACGATCA CCGCGAGCGG CCAGATCGGC
CATCAGCTGA TGAGCAAGGA CCAGGCGTTC GGCGCGCCGC GCAGCCAGCG CGATACGCCG
ACGTCCAATG TCGGGATCAA TGCCGCGTGG GAGCTCGACC TGTTTGGCCG CGTGCGCCGC
TCGATCGAGT CGCAGCGTGC GGAAACGGCG GCCAGCGCGG CCGACGTGCG TGCGGTGCGC
GTCGCGATCG CGGGGGAGGT CGCCAGCACG TACGTCGATC TGCGCGGCTC GCAGGAGCGG
TTGCGGATCG CCCGCGAGAA CGCCGACAAC CAGAAGCAGA CGCTCGCGCT GATCAATGCG
CGCGTCGGCG CGGGGCGAGG CTCCGAACTG GATGCGGCGC GAGCGCGAGC GCAGTACGAA
TCGACGACGT CGCGGATCGC CGTGTACGAA GCCGCGATCG GCGTCGACGA GCATCGGCTC
GCGGTGCTGA CCGGACAGAC GCCGGATGCG CTGATCGGCC GGTTCGACTT ACCGAAGACG
GGCACGCCGA CAGGCACGCC GGTGCCGCTG CCGGCGCTCG CGGCCGACAT CGATCCCGGC
ACGCCGGGCG ACCTGCTGCG CCGCCGCCCC GATGTCGCGG CCGCCGAGGC GCGGCTGCAC
GCGGCGACCG CGCGCGTCGG CGTCGCGACC GCCGACCTGT TCCCGCGCTT CACGCTGTCG
GGGCTGCTCG GTAGCGCGAC GAGCAGCTAC GGGTTTTTCC GCGCCGGCAG TGATACCAAC
CTGATCGCGC TCGGCATCGA CTGGTCGTTC CTCGATGTCG GCCGCGTGCG TGCGCGGATC
GCCGCGAGCG ACGCGGAAGC GGCCGGCCAG CTTGCACAGT ATCGGCAGAC CGTGCTCGGC
GCGCTGGAGG AAACCGAGAA CGCGTTGCTG CGTGTCGCCC GCACGCGTGA CGAGACCGCG
CACCTCGTGC GTGCGGCCGA CGACAGCGCA CGCGCGGCGC AGCTCGCGCA GGCGCGTTTC
TCGGCCGGCG CGATCGACTA CTACGAAGTG CTCGACGCGC AGCGGACGCT GCTGCAGGCA
CAGGATGCGG CGGCCGACGG GCGGATGCGC AGCGCCGCAT CGACGGTCGC GCTGTACAAG
GCGCTCGCGG GCGGCTGGCC GTCGGGCACG GAGCGGGGCA CGCCAGGTCC GCTCGCTCGG
TCGGGGCAGT AG
 
Protein sequence
MSAAFRLSAL AMSVTLAACA VGPDFKRPDT ATAARFARDV RPATQRDAAP ADTRTDTSPD 
ADAAFWRGFG DPTLTRLIDA ALAANQDLQV AVSRYDASNA LLSQATFDRY PTITASGQIG
HQLMSKDQAF GAPRSQRDTP TSNVGINAAW ELDLFGRVRR SIESQRAETA ASAADVRAVR
VAIAGEVAST YVDLRGSQER LRIARENADN QKQTLALINA RVGAGRGSEL DAARARAQYE
STTSRIAVYE AAIGVDEHRL AVLTGQTPDA LIGRFDLPKT GTPTGTPVPL PALAADIDPG
TPGDLLRRRP DVAAAEARLH AATARVGVAT ADLFPRFTLS GLLGSATSSY GFFRAGSDTN
LIALGIDWSF LDVGRVRARI AASDAEAAGQ LAQYRQTVLG ALEETENALL RVARTRDETA
HLVRAADDSA RAAQLAQARF SAGAIDYYEV LDAQRTLLQA QDAAADGRMR SAASTVALYK
ALAGGWPSGT ERGTPGPLAR SGQ