Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3623 |
Symbol | |
ID | 4095301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 752593 |
End bp | 754104 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638016920 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_623488 |
Protein GI | 107025977 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.392647 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCCG CTTTCCGTCT TTCCGCGCTC GCGATGTCGG TGACGCTCGC CGCATGCGCG GTGGGCCCCG ATTTCAAACG GCCCGATACC GCCACGGCCG CCCGGTTCGC GCGCGATGTT CGTCCGGCCA CGCAGCGTGA CGCGGCGCCG GCCGATACAC GAACCGACAC GTCGCCCGAC GCCGATGCCG CCTTCTGGCG CGGGTTCGGC GATCCGACGC TGACACGGTT GATCGATGCG GCGCTCGCCG CGAACCAGGA CTTGCAGGTC GCCGTATCGC GCTACGACGC GTCGAATGCG CTGCTGTCGC AGGCCACGTT CGACCGCTAT CCGACGATCA CCGCGAGCGG CCAGATCGGC CATCAGCTGA TGAGCAAGGA CCAGGCGTTC GGCGCGCCGC GCAGCCAGCG CGATACGCCG ACGTCCAATG TCGGGATCAA TGCCGCGTGG GAGCTCGACC TGTTTGGCCG CGTGCGCCGC TCGATCGAGT CGCAGCGTGC GGAAACGGCG GCCAGCGCGG CCGACGTGCG TGCGGTGCGC GTCGCGATCG CGGGGGAGGT CGCCAGCACG TACGTCGATC TGCGCGGCTC GCAGGAGCGG TTGCGGATCG CCCGCGAGAA CGCCGACAAC CAGAAGCAGA CGCTCGCGCT GATCAATGCG CGCGTCGGCG CGGGGCGAGG CTCCGAACTG GATGCGGCGC GAGCGCGAGC GCAGTACGAA TCGACGACGT CGCGGATCGC CGTGTACGAA GCCGCGATCG GCGTCGACGA GCATCGGCTC GCGGTGCTGA CCGGACAGAC GCCGGATGCG CTGATCGGCC GGTTCGACTT ACCGAAGACG GGCACGCCGA CAGGCACGCC GGTGCCGCTG CCGGCGCTCG CGGCCGACAT CGATCCCGGC ACGCCGGGCG ACCTGCTGCG CCGCCGCCCC GATGTCGCGG CCGCCGAGGC GCGGCTGCAC GCGGCGACCG CGCGCGTCGG CGTCGCGACC GCCGACCTGT TCCCGCGCTT CACGCTGTCG GGGCTGCTCG GTAGCGCGAC GAGCAGCTAC GGGTTTTTCC GCGCCGGCAG TGATACCAAC CTGATCGCGC TCGGCATCGA CTGGTCGTTC CTCGATGTCG GCCGCGTGCG TGCGCGGATC GCCGCGAGCG ACGCGGAAGC GGCCGGCCAG CTTGCACAGT ATCGGCAGAC CGTGCTCGGC GCGCTGGAGG AAACCGAGAA CGCGTTGCTG CGTGTCGCCC GCACGCGTGA CGAGACCGCG CACCTCGTGC GTGCGGCCGA CGACAGCGCA CGCGCGGCGC AGCTCGCGCA GGCGCGTTTC TCGGCCGGCG CGATCGACTA CTACGAAGTG CTCGACGCGC AGCGGACGCT GCTGCAGGCA CAGGATGCGG CGGCCGACGG GCGGATGCGC AGCGCCGCAT CGACGGTCGC GCTGTACAAG GCGCTCGCGG GCGGCTGGCC GTCGGGCACG GAGCGGGGCA CGCCAGGTCC GCTCGCTCGG TCGGGGCAGT AG
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Protein sequence | MSAAFRLSAL AMSVTLAACA VGPDFKRPDT ATAARFARDV RPATQRDAAP ADTRTDTSPD ADAAFWRGFG DPTLTRLIDA ALAANQDLQV AVSRYDASNA LLSQATFDRY PTITASGQIG HQLMSKDQAF GAPRSQRDTP TSNVGINAAW ELDLFGRVRR SIESQRAETA ASAADVRAVR VAIAGEVAST YVDLRGSQER LRIARENADN QKQTLALINA RVGAGRGSEL DAARARAQYE STTSRIAVYE AAIGVDEHRL AVLTGQTPDA LIGRFDLPKT GTPTGTPVPL PALAADIDPG TPGDLLRRRP DVAAAEARLH AATARVGVAT ADLFPRFTLS GLLGSATSSY GFFRAGSDTN LIALGIDWSF LDVGRVRARI AASDAEAAGQ LAQYRQTVLG ALEETENALL RVARTRDETA HLVRAADDSA RAAQLAQARF SAGAIDYYEV LDAQRTLLQA QDAAADGRMR SAASTVALYK ALAGGWPSGT ERGTPGPLAR SGQ
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