| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3619 |
|---|
| Symbol | |
|---|
| ID | 4095490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 746862 |
|---|
| End bp | 747623 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638016917 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_623485 |
|---|
| Protein GI | 107025974 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.19061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGCA ATGAACAGCA GCGAACGGCC ATCGTCACGG GCGGGTCGAG CGGAATCGGC
TTCGCAATCG CGAGCCGGCT GGTGCAGGAC GGGTATCGCG TCGCGATCGT CGGGCGCGAT
GCGGCGCGGC TGGAGGCGGC CGTCGCGCGG CTCGGCGGTG CGGCGATCGG GCAGGTGGGC
GATCTGAGCG TGCGGCATGA CGCGGAAGCG GTGGTCGCCG CGATCGTTGC AAGGTGGCCG
CGTATCGACG TCCTCGTCAA CAACGCGGGA TTGACCGGTC GCGTCGGCGC GGATACGAAG
GCGGGCGAAG CGGAGGCCGT GTGGGACGCG GTGCTCCATG CGAACCTGAA AAGCCTGTTC
CTGACGACGA TGGCCGTGCT GCCGCACGTG GCCGATCGCG CCGCGCGGAT CGTCAACATC
GGTTCGATCG CGGCGCGCGC CGGCAGCCTG TTGCCGGGCG GCCTCGCGTA TGCGGCCGCG
AAGGCCGGCG TCGAAGGCTT CACCGTCGCG CTGGCACGCG AACTCGGGCC GCGCGGCGCG
ACGGTCAATA CGGTCGCGCC CGGCTATATC GCCGGCACGC GTTTCTTTGG CGACAGCGGG
GTCGCGCCGG CCGTCGCGGC AATGATCCGC GTGCAGACGC CGGTTGGCCG CGCCGGACAA
CCGGACGACG TCGCGGACGC GGTCGCGTGG CTCGCCGGGC CGCGCGCGTC GTTCGTCACC
GGCGCGACGA TCGCGGTGAA CGGCGGCTGG CGCGTCGGGT GA
|
|---|
| Protein sequence | MTGNEQQRTA IVTGGSSGIG FAIASRLVQD GYRVAIVGRD AARLEAAVAR LGGAAIGQVG
DLSVRHDAEA VVAAIVARWP RIDVLVNNAG LTGRVGADTK AGEAEAVWDA VLHANLKSLF
LTTMAVLPHV ADRAARIVNI GSIAARAGSL LPGGLAYAAA KAGVEGFTVA LARELGPRGA
TVNTVAPGYI AGTRFFGDSG VAPAVAAMIR VQTPVGRAGQ PDDVADAVAW LAGPRASFVT
GATIAVNGGW RVG
|
|---|
| |