Gene Bcen_3555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3555 
Symbol 
ID4095330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp679690 
End bp680382 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content65% 
IMG OID638016854 
Productpeptidase M15D, vanX D-ala-D-ala dipeptidase 
Protein accessionYP_623422 
Protein GI107025911 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2173] D-alanyl-D-alanine dipeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCCCGCTA CCGTGATACC GCTCTCCGAT CCCGCCGTCC GCTCGATCGC CCTGCAAGAG 
TCACACGAAG GGTTCGTCGA TCTCGCAGGC TTCCATGACC GCATCGCCGT CGATCTCGAC 
CGCCGCGATA TCGAAAGCAG GAGCCCGCAT TTCCTGAAAG TGCGTCGCAG TGTGGCGGAA 
CGGCTGATCG CCGCCGCGCA CGCGTTGCCC GCCGGCCTGC GCCTGTACGT CAAGGAAGGC 
TATCGCCCGC TGGCCCTGCA GCGCCGGTCC TTCACCGAGC ATCTCGCGCA TCTGCGCCGG 
ACGCTGAATC CGCTGCCGGA CGAAGACACC CTGGTCGCCC TGACCAGCCA CTACGTCGCA 
CTGCCGGAAG TCGCCGCCCA TCCGACGGGC GCCGCCATCG ACCTCACGCT GATCTCGGCG 
GAAGGCATCG AGATCGACAT GGGCACCATC ATGAACGCCA CCGACCAGGA ATCGTCCGGC 
GCGTGCTACA CGCACAACAC ATTCATCAGC CGCGCGGCCG CGCGAAACCG CCAGATCCTG 
ATCGGCGCGC TGACCCGCGC CGGCTTCACG AATTACCCGT CCGAATGGTG GCATTGGTCG 
TTCGGCGACC GCTATTGGGC CGTCATGCAG AACGAATCAC ACGCAATTTA CGGTCCCGTC 
GAGGAAAGCA TGCTCGACGA AGCGTCGCGA TGA
 
Protein sequence
MPATVIPLSD PAVRSIALQE SHEGFVDLAG FHDRIAVDLD RRDIESRSPH FLKVRRSVAE 
RLIAAAHALP AGLRLYVKEG YRPLALQRRS FTEHLAHLRR TLNPLPDEDT LVALTSHYVA 
LPEVAAHPTG AAIDLTLISA EGIEIDMGTI MNATDQESSG ACYTHNTFIS RAAARNRQIL 
IGALTRAGFT NYPSEWWHWS FGDRYWAVMQ NESHAIYGPV EESMLDEASR