Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3552 |
Symbol | |
ID | 4095327 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 677912 |
End bp | 678637 |
Gene Length | 726 bp |
Protein Length | 241 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638016851 |
Product | short chain dehydrogenase |
Protein accession | YP_623419 |
Protein GI | 107025908 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTCGTCA CGGGTGCCTC GAGCGGAATC GGCCGCGCAT GCGCGGTCGC GCTGGCGCAG GCGGGTGCGC GCGTCGTCGC GGCGGGGCGC GACATGGCCG CGCTCGACAC GCTCGCCGGC GAGATTGCGT GCGATACGTT GCGCCTGGAT GTCGGCGGCG ATCAACACGC GATCGACGCA GCACTCGCCG CGTACGACGC GTTCGACGGC CTCGTCAATT GTGCGGGGAT CGCGTCGCTC GAACCGGCTC TCGAGGTCTG CGCCGCGCAG TTCGACCACG TGATGGCCGT CAATGCGCGC GGCGCGGCGC TCGTCGCGCG GGCCGTGGCG CGCAAGATGA TCGAACGCGA CGGACGCGGC GCGGCGCACG CACGGGGCAG CATCGTCAAC GTGTCGAGTC AGGCGGCGCT CGTCGGCCTG CCCGCGCATC TGAGCTATTG CGCATCGAAG GCAGCGATGG ACGCGATCAC GCGCGTGCTG TGCATCGAAC TCGGGCCGCA CGGCATTCGT GTGAACAGTG TGAACCCGAC CGTCACGCTC ACGCCGATGG CGCAGTTCGC GTGGAGCGAA CCGGAGAAGC GTGCGCCGAT GCTCGCTGCG ATTCCGCTCG GCCGGTTCGC GGAGCCGCAC GAAGTCGTCG AACCGATCCT GTTTTTGCTG AGCGATGCGG CGTCGATGAT CAGCGGCGTG TCGTTGCCGA TCGACGGCGG ATATACCGCG CGCTAG
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Protein sequence | MLVTGASSGI GRACAVALAQ AGARVVAAGR DMAALDTLAG EIACDTLRLD VGGDQHAIDA ALAAYDAFDG LVNCAGIASL EPALEVCAAQ FDHVMAVNAR GAALVARAVA RKMIERDGRG AAHARGSIVN VSSQAALVGL PAHLSYCASK AAMDAITRVL CIELGPHGIR VNSVNPTVTL TPMAQFAWSE PEKRAPMLAA IPLGRFAEPH EVVEPILFLL SDAASMISGV SLPIDGGYTA R
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