Gene Bcen_3496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3496 
Symbol 
ID4095841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp605712 
End bp606833 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content67% 
IMG OID638016795 
ProductPHB de-polymerase-like 
Protein accessionYP_623363 
Protein GI107025852 
COG category[I] Lipid transport and metabolism 
COG ID[COG3243] Poly(3-hydroxyalkanoate) synthetase 
TIGRFAM ID[TIGR01849] polyhydroxyalkanoate depolymerase, intracellular 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.270414 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAC GCGACACGCC TTCTCCCGCC GTCAGCGCCC CCGCGCTGCC GATTTTCTGG 
CCGATGGCTG CCGCCACGGC GATGTTCGCG GCCGGCGCCG AGATCGCGGC GCGCAATCTG
CGCTTTCTCG CGGAAGAGGA GAAGCTCCAT TTCGAAGCAC ATCCGGCGCT GGCATCGCCG
AACCGGCCGT TGCTGGAACT GCGGACGATG ACGTTTCGCG ATTATTCGGC CGCGCCGGCG
CACGGGCTGC CGACGATCGT CGATGCGCCG TACGCGGGAC ACAGCGCGAT GATCGCCGAC
TACCAGCCGG GGCAGAGCCT GATGCAGACG CTGCGCGAGC ACGGCGTGAC GCGTGTGTAC
CTGACCGACT GGCGCTCGGC CACCGAGGAC ATGAAGGACC TCGAGATCGA CCAGTATCTG
GCCGAGCTGA ACGTGTGCGT CGACGAACTC GGCGGCCGCG TGAATCTCGT CGGGCTGTGC
CAGGGCGGCT GGATGTCGGC GATGTATGCG GCACGTTTCC CGCACAAGGT CGCGAGCCTC
GTGCTGGCGG GCTCGCCGAT CGACACCGAC GCGGGCGACG GCCCGATCAA GCGGATGGTG
CACACGTATC CGACGGCGTT CTACGACGAA CTCGTCGCGA TGGGCGGCGG GCTGATGCGT
GGGCGCTTCA TGCTGCGCGG CTGGAAGAAC ATGCATCCCG ACCAGCACTA TCTCGCCGAG
CACATCGACC TGTACGAGCA TCTCGACGAT CCGGAATACC TGCGCAAGCG CGAGGTGTTC
GCGAACTGGT ACGAAAGCCC GATCGACCTG CCGGGACGCT GGTACCTGCA GGCGATCGTG
CAGATCTTCA AGGAGAACCG GCTCGCGAAA GGTACGTTCG TCGCGCTCGG GCGCACGCTC
GACCTGAAGG ACGTCGCGTG CCCGGTCTAT CTGCTCGCCG GCGAGGCCGA CGACATCACG
ACGCCGGAGC AGGTGTTCGG CGCGCGCGAT CTTCTCGGGA CGCCCGCGTC GCGGATCGAG
AGCCGGCTCG TGCCGGGCGG CCATATAGGC ATGTTCATGG GGACGCGCAC GCTGGCGACG
GTGTGGCCCG ACATCGCGCG ATGGATCGCG GCGCAGCGCT AG
 
Protein sequence
MTARDTPSPA VSAPALPIFW PMAAATAMFA AGAEIAARNL RFLAEEEKLH FEAHPALASP 
NRPLLELRTM TFRDYSAAPA HGLPTIVDAP YAGHSAMIAD YQPGQSLMQT LREHGVTRVY
LTDWRSATED MKDLEIDQYL AELNVCVDEL GGRVNLVGLC QGGWMSAMYA ARFPHKVASL
VLAGSPIDTD AGDGPIKRMV HTYPTAFYDE LVAMGGGLMR GRFMLRGWKN MHPDQHYLAE
HIDLYEHLDD PEYLRKREVF ANWYESPIDL PGRWYLQAIV QIFKENRLAK GTFVALGRTL
DLKDVACPVY LLAGEADDIT TPEQVFGARD LLGTPASRIE SRLVPGGHIG MFMGTRTLAT
VWPDIARWIA AQR