Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3483 |
Symbol | |
ID | 4095906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 595837 |
End bp | 597075 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638016782 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_623350 |
Protein GI | 107025839 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCTCG ATTCCCGCCA GCTCGCGGCC CTCGCGCAGC AATACGGCAC CCCGCTGTGG GTGTACGACG CCGACGTCAT CCGCGACCGC ATTGCCCAAC TTCGCCAGTT CGACGTGATC CGTTATGCGC AGAAGGCGAA TTCGAACGTC CATATCCTCA AGCTGATGCG TGACGAAGGC GCGTGCGTCG ACGCCGTATC GCTCGGCGAG ATCGAGCGCA GCCTCGCGGC CGGTTTCAGC CCGAGCGGCG AGCCGGAAGG CGTCGTGTTC ACGGCCGACC TGATCGACCG TCCGACGCTC GCGGCGGTGC TCAAGCATGG CGTCACCGTG AACGCCGGCT CGCTCGACAT GCTCGCGCGC ATCGGCGAGC ACGCGCCCGG CCACCGCGTG TGGCTGCGCG TCAACCCCGG GTTCGGCCAC GGCCACAGCA ACAAGACCAA CACCGGCGGC CCGCAGAGCA AGCACGGCAT CTGGATCGAC GACGTACCGC GCGCGATCGA GATCGTGCGC CAGTACGGGC TGAAGCTGGT CGGCATCCAT ATGCACATCG GTTCGGGCGT CGACTACGGC CACCTGTCGC AGGTGTGCGA TGCGATGGTC GACCTCGTCA CGTCGCTCGG CCACGACATC GACGCGATCT CGGCCGGCGG CGGCCTGTCG ATCCCGTATC GCGACGGCGA GCCGCGCGTC GACGTCGGTC ACTACTTCAA CCAGTGGGAC GCCGCGCGCA AGCGGATCGA ACGGCATCTC GGCCACCCGG TGCGCATCGA GATCGAACCG GGCCGCTTCC TCGTCGCCGA AGCCGGCACG CTCGTCACCG AAGTGCAGGC CGTCAACCGT CGGCCGAAGC ACGATTTCGT GCTGATCGAC GCCGGCTTCA ACGACCTGAT GCGCCCGTCG ATGTACGGCA GCTATCACGC GGTGTCGGTG CACGCGCACG ATGGCGCGCT GCCCGCCGGC CGGCCGCTCG TCGACCTCGC GATCGCCGGA CCGCTGTGCG AATCGGGCGA CGTGTTCACG CAGGATGCCG GCGGCGTGGT CACGCACCGA AAGCTCGCGC AGCCGCAGAT CGGCGACCTG CTGTTCCTGC ACGACGCAGG CGCATACGGC GCGTCGATGT CGTCGAACTA CAACAGCCGG CCGCTCGCGC CGGAGGTGCT GGTCGATCGC GGCACGCCGC GGTTGATCCG CCGCCGGCAG ACGATCGGCG AATTGCTCGC GCTCGAAACG TTCGAGTAA
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Protein sequence | MSLDSRQLAA LAQQYGTPLW VYDADVIRDR IAQLRQFDVI RYAQKANSNV HILKLMRDEG ACVDAVSLGE IERSLAAGFS PSGEPEGVVF TADLIDRPTL AAVLKHGVTV NAGSLDMLAR IGEHAPGHRV WLRVNPGFGH GHSNKTNTGG PQSKHGIWID DVPRAIEIVR QYGLKLVGIH MHIGSGVDYG HLSQVCDAMV DLVTSLGHDI DAISAGGGLS IPYRDGEPRV DVGHYFNQWD AARKRIERHL GHPVRIEIEP GRFLVAEAGT LVTEVQAVNR RPKHDFVLID AGFNDLMRPS MYGSYHAVSV HAHDGALPAG RPLVDLAIAG PLCESGDVFT QDAGGVVTHR KLAQPQIGDL LFLHDAGAYG ASMSSNYNSR PLAPEVLVDR GTPRLIRRRQ TIGELLALET FE
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