| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3480 |
|---|
| Symbol | |
|---|
| ID | 4095903 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 591680 |
|---|
| End bp | 593113 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638016779 |
|---|
| Product | putative nicotinate phosphoribosyltransferase |
|---|
| Protein accession | YP_623347 |
|---|
| Protein GI | 107025836 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0732937 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAACG ATCCCGGCGG CTTTGCCGCG GTTCTCGCCA ATCCGATTCT CAACACGGAT
TCGTACAAGG CTTCCCACTT CCTGCAGTAT CCGCCGGACG CATCGGCGAT GTTCTCGTAC
GTCGAATCGC GCGGCGGCCG CTACGACCGC ACGCTGTTCT TCGGCCTGCA GATGCTGCTG
AAGGAGTATC TGTGCAAGCC CGTGACGCAC GCGATGATCG ACGACGCGCG CGATTTCTTC
ACGGTGCACG GCGAGCCGTT CAACGAAGCA GGATGGCGTC ATATCGTCGA GCGCTACGAC
GGCTACCTGC CGGTGAAGAT CCGAGCGGTG CCGGAAGGCT CGATCGTGCC GGTGCACAAC
GTACTGATGA CGGTCGAATG CGACGATCCG CAGGTGTTCT GGCTCGCGTC GTATCTCGAG
ACGATGCTGT TGCGCATCTG GTATCCGGTG ACGGTGGCGA CCCGTAGCTG GCATCTTCGG
CAAACGATTC GCCGTTTCCT CGAACGGACC GATGACGATC TCGCGCAACT GCCGTTCAAG
CTGCACGACT TCGGCGCACG CGGCGTGTCG AGCGCGGAAT CGGCCGCGAT CGGCGGCGCC
GCGCACCTCG TGAGCTTCAT GGGCTCGGAC ACGGTGCTCG GCGTGCTGGC CGCGAACCGC
TTTTATCGCG AGCCGATGGC CGCGTATTCG GTGCCGGCGG CCGAGCACAG CACGATCACG
TCGTGGGGGC GCGAAGGCGA GGCCGATGCA TACCGCAACA TGATCAAACG CTTCGGGTTG
CCGGGCGCGA TCGTATCGGT CGTATCGGAC TCCTACGATC TGTTCGCCGC GCTCGATCTG
TGGGGCGGCG AACTCCGGCA GGCGGTGATC GATTCGGGCG CGACGCTCGT CGTGCGTCCC
GATTCCGGCG ACCCGGTGAC GATCGTGCTG CAGACCGTGC GGGCGCTCGA TGCGTCGTTC
GGTTCGACCG TGAACGGCAA GGGGCGGCGC GTGCTGAACC ACGTGCGCGT GATCCAGGGC
GACGGTGTCG ACGAGCAGTC GATCGAGGCG ATCCTCGTCG CGCTCGACGA GGCGGGCTAT
GCGGCCGGCA ACGTGATGTT CGGCATGGGC GGTGCGTTGT TGCAGCGGGT GAACCGCGAT
ACGCAGCGCT TCGCGATGAA GTGTTCGGCG ATCCGGCGCG GCGACGTGTG GCACGACGTC
CGCAAGGATC CGGTCACCGA TCAGGGCAAG CGCTCGAAGC AGGGGCGGCT GACGCTGTTG
CGCAACTGGC GCTCTGGCGA GTATCGGACG GTGACGTTGC CGGTTGCGTG GGACGATCGT
GCGCTGGAAG GCGAATGGGA CGAGGCGCTC GAGACGGTGT TCGACACGGG GCGCCTGCTC
GTCGATACGT CGTTCGCCGA GGTGCGGGCG AGGGCGCATG CGGGGGAGGT GTGA
|
|---|
| Protein sequence | MQNDPGGFAA VLANPILNTD SYKASHFLQY PPDASAMFSY VESRGGRYDR TLFFGLQMLL
KEYLCKPVTH AMIDDARDFF TVHGEPFNEA GWRHIVERYD GYLPVKIRAV PEGSIVPVHN
VLMTVECDDP QVFWLASYLE TMLLRIWYPV TVATRSWHLR QTIRRFLERT DDDLAQLPFK
LHDFGARGVS SAESAAIGGA AHLVSFMGSD TVLGVLAANR FYREPMAAYS VPAAEHSTIT
SWGREGEADA YRNMIKRFGL PGAIVSVVSD SYDLFAALDL WGGELRQAVI DSGATLVVRP
DSGDPVTIVL QTVRALDASF GSTVNGKGRR VLNHVRVIQG DGVDEQSIEA ILVALDEAGY
AAGNVMFGMG GALLQRVNRD TQRFAMKCSA IRRGDVWHDV RKDPVTDQGK RSKQGRLTLL
RNWRSGEYRT VTLPVAWDDR ALEGEWDEAL ETVFDTGRLL VDTSFAEVRA RAHAGEV
|
|---|
| |