Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3473 |
Symbol | |
ID | 4095896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 584657 |
End bp | 586171 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638016772 |
Product | spermidine synthase |
Protein accession | YP_623340 |
Protein GI | 107025829 |
COG category | [R] General function prediction only |
COG ID | [COG4262] Predicted spermidine synthase with an N-terminal membrane domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCATA AGCGTGCGCT CGTCCTGTCG ATTCTCGTGC TCGCGTCGTG CGGGCTCGGC TACGAACTGA TCAGCAGCGC ACTGTCGAGC TATCTGCTCG GCGACTCGAT CCTGCAGTTC TCGTCGGTGA TCGGCTGCTA CCTGTTCGCG ATGGGGATCG GCTCGTGGCT CGCGAAGTTC GTCGAAGACG ACGACGTGCT CGACCGCTTC GTCGACATCG AGCTGCTCGT CGGCCTGCTC GGCGGCGTGT CGGCAGCGCT GCTGTTCGTG GTGTTCGCAT GGCTCGCCGC GCCGTTTCGC GCGGCGCTTT ACGCACTGGT GCTCGCGCTC GGCCTGCTGA TCGGGATGGA GATTCCGCTC GTGATGCGCG CGTTCCAGCA GCGGCGCCAG GCGTTCCGCC ATACCGTCAG CGAGGTGCTG ACCTTCGACT ATCTCGGCTC GCTCGCCGTG TCGCTGATCT TCCCGCTGGT GCTCGCGCCG CGCCTCGGCC TGCTGCGTAC GAGCTTCCTG TTCGGTCTCC TGAACGCATT CGTCGCATTG TGGACGACCC ACCTGTTCCG CGACGAGATC CGCAACGTGC GCGGCAAGCT GATGCGTGCG TCGCTCGTGA TCGGGCTGCT GGTCGCCGGG TTCGCGCTGT CGGATCGCAT CACGCACTGG GCCGAACACG GCGTGTACGG CGACGAGACG ATCTACTCGG AAACGACGCC GTACCAGCGC ATCGTGCTCA CGCAGTGGCA CGACGACATG CGACTGTACC TGAACGGCAA CCTGCAATTC TCGTCGCGCG ACGAGCACCG CTATCACGAG GCGCTGATCC ATCCGGCGAT CGAGGCACTG CCGTGGGCGA AGCGCGTGCT CGTGCTGGGC GGCGGCGACG GCCTCGCGGT GCGCGAACTG CTCAAGCACC GCAACCTCGA GCAGATCACG CTCGTCGATC TCGATCCGGC GATGACGAAG CTGTTCTCGA CGTCGGCACC GCTCGTCAAG CTGAACCAGG GTGCGCTGAA GGACCCGCGC GTGCACGTGA TCAACGACGA CGCGGTGCGC TGGCTCGAAT CGAATGCCGA CGTGTACGAC GCGATCGTCG TCGATTTCCC CGATCCGACC AATTTCGGGC TCGGCCGCCT GTATTCGGTG CCGGTGTTCC GGCTGCTGGC GCGCCACCTG TCGGAGAACG GTTACACGGT GATCCAGTCG ACGTCGCCGT ATTTCGCGCC GCACGCGTAC TGGACCATCA TCGCGACGCT GCACGAAGCC GGGCTCAACA CGTGGCCGTA CCACTGCTAC GTGCCGTCGT TCGGCGACTG GGGCTTCGTG ATCGCCGGCA AGCGCCGCGA CTTCACGGTG CCGACGCATT ACTCGGTGCC GACGCGCTGG CTCGATGCGC AAACGGCCGC CGAGATGTTC CACTTCCCGG CCGACATGCC GGCGCTGTCG ATGTCGCCGA ACGAACTCAA CGACCAGCCG CTCGTGCGCC GCTTCGACGA CGACTGGAAG CACGTGCTGC GCTGA
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Protein sequence | MLHKRALVLS ILVLASCGLG YELISSALSS YLLGDSILQF SSVIGCYLFA MGIGSWLAKF VEDDDVLDRF VDIELLVGLL GGVSAALLFV VFAWLAAPFR AALYALVLAL GLLIGMEIPL VMRAFQQRRQ AFRHTVSEVL TFDYLGSLAV SLIFPLVLAP RLGLLRTSFL FGLLNAFVAL WTTHLFRDEI RNVRGKLMRA SLVIGLLVAG FALSDRITHW AEHGVYGDET IYSETTPYQR IVLTQWHDDM RLYLNGNLQF SSRDEHRYHE ALIHPAIEAL PWAKRVLVLG GGDGLAVREL LKHRNLEQIT LVDLDPAMTK LFSTSAPLVK LNQGALKDPR VHVINDDAVR WLESNADVYD AIVVDFPDPT NFGLGRLYSV PVFRLLARHL SENGYTVIQS TSPYFAPHAY WTIIATLHEA GLNTWPYHCY VPSFGDWGFV IAGKRRDFTV PTHYSVPTRW LDAQTAAEMF HFPADMPALS MSPNELNDQP LVRRFDDDWK HVLR
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