Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3455 |
Symbol | |
ID | 4096224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 567016 |
End bp | 568470 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638016754 |
Product | peptidase M20 |
Protein accession | YP_623322 |
Protein GI | 107025811 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.163338 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTTCCG TCGACACTAC CCCCGTCCTC GACCATGACA AGCTCGTTAC CTTCATCGAG CGCAAGTGGA ACGATGAAAT CCTCCATGCG CTGACCGACT ACATCGCGAT CCCCGCGAAG AGCCCCGCAT TCGACCCCGA CTGGGCCAAG CGCGGCTATC TCGAGCGCGT CGTCACCGAC GCCGCGCAGT GGGCCGAGCG GCAACCCGTG AAGGGCCTGA AGCTCGAAAT CGTGCGCCTG CCGGGCCGCA CGCCGGTGAT CTTCTTCGAG TCGCCGGCCA CGCGCTCGGG CAGCACCGAC ACGATCCTGC TGTATGGCCA CCTCGACAAG CAGCCCGAAT TCGACGGCTG GCGCGCGGAC CTCGGCCCGT GGACGCCGAA GTTCGAGAAC GGCAAGCTGT ACGGCCGCGG CGGCGCGGAC GACGGCTATG CGATCTACGC GAGCCTCGCG GCGCTCGGCG CGCTCGACGA GCAGGGCATC GAGCGGCCGC GCTGCGTCGG CCTGATCGAG ACCTGCGAGG AGTCGGGCAG CTACGACCTG CTGCCGTACG TCGACGCGTT GCGCGACCGG CTCGGGCAGG TCTCGCTCGT CGTGTGCCTC GATTCGGGCG CCGGCAACTA TGACCAGATG TGGCTCACCA CGTCGCTGCG CGGCCTGGTG TCCGGCGACC TGCAGGTCGA GGTGCTGGAA GAGGGCATCC ACTCGGGCGT GTACGGCGGC ATCGCGCCGT CGAGCTTCCG CGTGATGCGC CAGTTGTTCG AGCGCCTCGA GGACGCGAAG AACGGCAACC TGCTGCCGGG CGCGTTCCAT TGCGAGATTC CGTCGAGCCG CGTGCGCGAA GCCGAGGCCG CCGCCGCGAT CCTCGGCGAC ACGGTATGGA AGGGGCTGCC CTGGGCGTGC GGCCAGGACG GCAAGCCCGT GCTGCCGACC ACGACCGACC CGCGCGAGGC GCTGCTGAAT TCGACGTGGC GTCCGTCGTT GTCGGTCACC GGCGCGGCCG GCATGCCGGC GCTCGCCGAT GCGGGCAACG TGCTGCGTCC GCGTACCGCG TTCAAGCTGT CGCTGCGGCT GCCGCCGCTC GTCGACGCCG CGCAGGCGGT GCAGCAGCTG AAGGAATTGC TCGAACTCGA TCCGCCGTAC AACGCGAAGG TCACGTTCAA GCCGGACGCC GGCGCCGCGA CGGGCTGGAG CGCGCCGGAT CTCGCGCCGT GGCTTGCGTC GTCGCTCGAC GCCGCATCGC GCCGCCACTT CGGCGCCGAC TGCGCGTACA TGGGCCTCGG CGGCACGATC CCGCTGATGA ACGTGCTTCA GGAAGGCTTT CCCGCCGCGC AATTCATGGT GTGCGGCGTG CTCGGGCCGA AGTCGAACGC GCACGGCCCG AACGAGTTCC TGCACGTGCC GTACGCGAAG AAGCTCACGG CGGCGGTGGC CGACGTGATC GCGACCGCGC GCTGA
|
Protein sequence | MTSVDTTPVL DHDKLVTFIE RKWNDEILHA LTDYIAIPAK SPAFDPDWAK RGYLERVVTD AAQWAERQPV KGLKLEIVRL PGRTPVIFFE SPATRSGSTD TILLYGHLDK QPEFDGWRAD LGPWTPKFEN GKLYGRGGAD DGYAIYASLA ALGALDEQGI ERPRCVGLIE TCEESGSYDL LPYVDALRDR LGQVSLVVCL DSGAGNYDQM WLTTSLRGLV SGDLQVEVLE EGIHSGVYGG IAPSSFRVMR QLFERLEDAK NGNLLPGAFH CEIPSSRVRE AEAAAAILGD TVWKGLPWAC GQDGKPVLPT TTDPREALLN STWRPSLSVT GAAGMPALAD AGNVLRPRTA FKLSLRLPPL VDAAQAVQQL KELLELDPPY NAKVTFKPDA GAATGWSAPD LAPWLASSLD AASRRHFGAD CAYMGLGGTI PLMNVLQEGF PAAQFMVCGV LGPKSNAHGP NEFLHVPYAK KLTAAVADVI ATAR
|
| |