Gene Bcen_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3454 
Symbol 
ID4096223 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp565868 
End bp566938 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content74% 
IMG OID638016753 
Product2-nitropropane dioxygenase, NPD 
Protein accessionYP_623321 
Protein GI107025810 
COG category[R] General function prediction only 
COG ID[COG2070] Dioxygenases related to 2-nitropropane dioxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGATGC TGCCTTCCCG TTTGCCGTTG ATCCAGGCCC CGATGGTCGG CTCGCTGAGC 
CCGCTCGCGA TCGCCGTGTG CGAAGCCGGC GGGCTCGGTT CGCTCGCGTG CGCGGCGCTC
GGCCCGCAGC AGTTGCGCGA CGAGATCGCG GCGATCCGTG CGCGCACGGC CGCGCCGTTC
AACGTGAATT TCTTCTGCCA CGCGCCGCCC GCGCCCGATG CCGAGGTCGA TGCGCGCTGG
CGCGCGGCGC TCGCCGGCTA CTACGCGGAA GCCGGGCTCG ACCCGGCCGA CGTGAAAGGC
GGCCCCGGCC GCGCGCCGTT CGACGATGCG ATGTGCGCGG TCGTCGAGGA ACTGCGGCCG
GCCGTCGTGA GCTTCCACTT CGGACTGCCG CACGACACGC TGCTCGACCG TGTGCGCCGC
ACGGGCGCGC AGGTGGTGTC GTCCGCGACG ACCGTCGAGG AGGCGCGCTG GCTCGATGCG
CGCGGCGTCG ACGCGATCGT CGCACAGGGG GCGGAGGCCG GCGGCCATCG CGGGATGTTC
CTGACCGACG ATATCCACGC GCAGCCGGGC CTGTTCGCGT TGCTGCCGCA GATCGTCGAT
GCCGTACGCG CGCCGGTGAT CGCGGCCGGT GCGATCGCCG ACGGGCGCGG CATCGCGGCC
GCGTTCGCGC TCGGCGCGAG CGCGGTGCAG ATCGGCACCG GCTATTTGCT GACGCCGCAG
GCCGGTCGTT CGGCCCAGCA TCGTGCGGCC GTGCGCGCCG CCCGCGACGA CGGTACGCGC
ATCACCAACC TGTACACGGG CCGCCCCGCG CGCGGGCTGT TGACGCGCTT CATGCGGGAA
CAGGGGCCGA TGAGTGCGCT CGCGCCCGCG TTTCCGCTCG CGACGGCCGC GGTCGATCCG
CTGCGCGGCG CGTTCGAGCG GCAGGGCCGC GACGATTTCT CGCTGCTGTG GTCGGGCGAG
GCCGCGGCGC TCGCGCGCGA AGAGGATGCG GGTGAGCTCA CGCGACGGCT GTGGCGCGAC
GCGCTCGCCT GCGCGGCCGG GCTGCGCGAC GCGTTTCCGA ACGCTGGCTG A
 
Protein sequence
MTMLPSRLPL IQAPMVGSLS PLAIAVCEAG GLGSLACAAL GPQQLRDEIA AIRARTAAPF 
NVNFFCHAPP APDAEVDARW RAALAGYYAE AGLDPADVKG GPGRAPFDDA MCAVVEELRP
AVVSFHFGLP HDTLLDRVRR TGAQVVSSAT TVEEARWLDA RGVDAIVAQG AEAGGHRGMF
LTDDIHAQPG LFALLPQIVD AVRAPVIAAG AIADGRGIAA AFALGASAVQ IGTGYLLTPQ
AGRSAQHRAA VRAARDDGTR ITNLYTGRPA RGLLTRFMRE QGPMSALAPA FPLATAAVDP
LRGAFERQGR DDFSLLWSGE AAALAREEDA GELTRRLWRD ALACAAGLRD AFPNAG