Gene Bcen_3411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3411 
Symbol 
ID4094180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp515060 
End bp516598 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content71% 
IMG OID638016711 
Productmajor facilitator transporter 
Protein accessionYP_623279 
Protein GI107025768 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.154206 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCTAT CCGACTCCCG CAGGAATGCG GTCGCGCTCG CGGCCGTCTG TCTCACGTCG 
CTGATGTTCG GCCTCGAGAT CTCGAGCGTG CCGGTGATCC TGCCGACGCT CGAACACGTG
CTGCATGGCG ATTTCAACGG CATGCAGTGG ATCATGAACG CGTACACGAT CGCGTGTACG
ACGGTGCTGA TGGCGGCCGG CACGCTTGCG GACCGGTTCG GCCGCAAGCG CGTGTACGTC
ATCGGCACCG TGCTGTTCGG CGCGACGTCG CTGCTGTGCG GGCTCGCGCC GAACGTGCCG
GTGCTCGTCG CGGGCCGGCT GCTGCAGGGC GCGAGCGGCG GCGCGATGCT GATCTGCCAG
ATCGCCGTGC TGTCGCACCA GTTCCGCGAA GGGCGCGAGC GCGGCCGCGC GTTCGGAATC
TGGGGGATCG TGTTCGGCAT CGGGCTCGGC TTCGGGCCGA TCGTCGGCGG CGCGATCGTC
GCGCTGGCGA GCTGGCCGTG GGTGTTCCTC GTCCATGCGC CGCTCGCGGC CGTCGCGCTC
GTGCTGATCG GCGGCGCGGT GCAGGAGTCG CGCGATCCGC ATGCGGGCGC GCTCGATGTG
GCGGGCATCG TCACGCTGTC GCTCGCGGTG CTCGGCCTCG CGTTCTACAT CACCCAAAGC
GCCGAACTCG GGCTGACGAG CGCGGCCGGC CTCGGTGTGC TCGGTGCGAC CGTGCTCGCG
GTGCTCGGCT TCGTCATCGC GGAGCGCGCC AGCGCACGGC CGATGTTCGA CTTCTCGGTG
TTCCGGATTC GCGCGTTCAC CGGCGCGATC TTCGGCTCGA TGGGGATGAA CTTCAGCTTC
TGGCCGTTCA TGATCTACCT GCCGATCTGG TTCCAGGTCG CGCTCGGCTA CGACAGCGTG
ACGGCCGGCC TCGCGTTGCT CGCGTACACG CTGCCGACGC TGATCGCGCC GCCGTTCGGC
GAACGGCTTG CATTGCGCTA CGGGCCGGGC GTCGTGATTC CGGCCGGCCT GTTCACGATC
GCGGCCGGTT TCGTGCTGAT GCGGTTGGGC AGCGCGGCCG ATCATGCGAG CTGGCTGACG
ATGCTGCCGG GCTGCGTGAT CGCCGGCATC GGGCTCGGCT TGACCAATAC GCCCGTCACC
AACACGACGA CGGGCGCGGT GCCGTGTGCG CGGGCCGGGA TGGCGTCGGG CATCGACATG
AGCGCGCGGA TGATCTCGTT GGCGCTGAAC ATCGCGACGA TGGGCTTCGT GCTGGTGGCG
GGGATCGTCG CGAGCCTGAA GGGCGGGCCG GCCGGCGCGA TCGGCGACGC GGCGCTGCGC
CGGCTCGCGC AGGAGATCGC GGCGGGCCGC ACCGACGGGC TGCAGGCGAT CGCGCCGGCG
CTCGCGCAGG CCGACCCGAG CGGCGCGGCG TTGCACGCGG CGCTCGTGCA TGGCTTCGGC
TGGGTGATGG TGTACGGCGC GGCGGGCGTG GCCCTGCTCG CGACCGCGAG CGCGGTGGCG
TTCGCGCCGG CGCGGCGTGG AGCGGCCGTG TGCGAATGA
 
Protein sequence
MTLSDSRRNA VALAAVCLTS LMFGLEISSV PVILPTLEHV LHGDFNGMQW IMNAYTIACT 
TVLMAAGTLA DRFGRKRVYV IGTVLFGATS LLCGLAPNVP VLVAGRLLQG ASGGAMLICQ
IAVLSHQFRE GRERGRAFGI WGIVFGIGLG FGPIVGGAIV ALASWPWVFL VHAPLAAVAL
VLIGGAVQES RDPHAGALDV AGIVTLSLAV LGLAFYITQS AELGLTSAAG LGVLGATVLA
VLGFVIAERA SARPMFDFSV FRIRAFTGAI FGSMGMNFSF WPFMIYLPIW FQVALGYDSV
TAGLALLAYT LPTLIAPPFG ERLALRYGPG VVIPAGLFTI AAGFVLMRLG SAADHASWLT
MLPGCVIAGI GLGLTNTPVT NTTTGAVPCA RAGMASGIDM SARMISLALN IATMGFVLVA
GIVASLKGGP AGAIGDAALR RLAQEIAAGR TDGLQAIAPA LAQADPSGAA LHAALVHGFG
WVMVYGAAGV ALLATASAVA FAPARRGAAV CE