Gene Bcen_3407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3407 
Symbol 
ID4094176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp511056 
End bp511955 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content70% 
IMG OID638016707 
Product3-hydroxyisobutyrate dehydrogenase 
Protein accessionYP_623275 
Protein GI107025764 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID[TIGR01692] 3-hydroxyisobutyrate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.373946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATCG GATTTATCGG CCTCGGCCAC ATGGGCGCGC CGATGGCGCT GAACCTGCTG 
AAAGCCGGCC ACGACGTGCA TGCGTTCGAC CTGAGCGCCG ACGCATTGCG CGCGCTGCAG
GACGCCGGCG CGCAGGTGGC AGCTTCCCCG CGCGATGCGG CATCGGGCGC GACGTTCGTG
ATCACGATGC TGCCGGCCGC GCCGCACGTG CGCTCGGTGC TGTCCGGCGA GAACGGCGTG
CTGGCCGGCC TCGGTGCGGG CGCGACCGTG ATCGATTCGA GCACGATCGA CCCGGCGAGT
GCGCAGGCGT TCGGCGCGCT GGTGCGCGAG CACGGCGGCG CGTTCGTCGA TGCGCCGGTG
TCGGGCGGCA CCGGCGGCGC GGCGGCCGGC ACGCTGACCT TCATGGTCGG CGGCAGCGAC
GCGGATTTCG AGCGCGTGAA GCCGGTGCTC GCCGGGATGG GCAAGAACAT CGTCCATTGC
GGCGCGACCG GGATGGGGCA GGTCGCGAAG GTTTGCAACA ACCTCGTGCT CGGCATCTCG
ATGGCGGCGG TGTCGGAAGC GATGTCGCTC GGCGTCGCGC TCGGCATCGA CCCGAAGGTG
CTGGCCGGCA TCGTCAACAC GTCGACGGGC CGCTGCTGGA GTTCGGACAC CTACAACCCG
TATCCGGGCG TGATCGAGAC CGCGCCGTCC TCGCGCGGCT ACTCGGGCGG CTTCGGCACC
GACCTGATGC TGAAGGATCT CGGCCTCGCG AACGATGCGG CGAAGCAGGC GCGCCAGCCC
GTCTATCTCG GCGCGCTCGC GCAGCAGCTG TACCAGACGA TGAGCAGCCG CGGCGACGGC
CAGCTCGATT TCTCGGCGGT GATCCGCCTG TATCAACCGG CCACGAAGAA GGACGCGTGA
 
Protein sequence
MKIGFIGLGH MGAPMALNLL KAGHDVHAFD LSADALRALQ DAGAQVAASP RDAASGATFV 
ITMLPAAPHV RSVLSGENGV LAGLGAGATV IDSSTIDPAS AQAFGALVRE HGGAFVDAPV
SGGTGGAAAG TLTFMVGGSD ADFERVKPVL AGMGKNIVHC GATGMGQVAK VCNNLVLGIS
MAAVSEAMSL GVALGIDPKV LAGIVNTSTG RCWSSDTYNP YPGVIETAPS SRGYSGGFGT
DLMLKDLGLA NDAAKQARQP VYLGALAQQL YQTMSSRGDG QLDFSAVIRL YQPATKKDA