Gene Bcen_3391 details

Gene Information

• Locus tag: Bcen_3391
• ID: 4094160
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008061
• Strand: +
• Start bp: 491617
• End bp: 493575
• Gene Length: 1959 bp
• Protein Length: 652 aa
• Translation table: 11
• GC content: 68%
• IMG OID: 638016691
• Product: tetratricopeptide TPR_2
• Protein accession: YP_623259
• Protein GI: 107025748
• COG category: [R] General function prediction only
• COG ID: [COG4783] Putative Zn-dependent protease, contains TPR repeats

Plasmid Coverage information

• Num covering plasmid clones: 16
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGAGCATC GTTCGGGATG GGGGAGGGCG CGCCGTCTGC TGGCAGGCGC ATGGTTGCTC 
GCGGCCGGCA TGTCGATGGC CGACGGGGCC GTTGGATCGG ACGACGACGC GATCGGTCGG 
CGCGCACCCG GTGAGGTCGA CATCGTCGCG GGCGACGTCA CGACGGGTGG CATCGTCGTG 
GCGCCGGGGC GCGTCGCGAC GCCGTGTCAT CGGCTCGCCG GCCGACCGGC ATTCGACATT 
GCATCGGCCG ATGGCCGCCG TCTTCCCGCG CGACTCGTCG CGGGCAACCA GGATCGGGAC 
ATCTGCATCA TCGAAGCGAC GGGTCTCGAC GTCGCCGCCG TGCCGTTGAC GGCGCGAAGT 
CCGGAAGCGG CCACGACCGC CTATCTGGCG GGCGCGCGAT TCGACCGCCG TGATCCCGTT 
GCGTTGCGCG TGTGCTGCCA TGCATGGGCC GCGGACGGCG GCGTGCATTC CGGCCTGCTC 
GCGTCGCCGA ATCCGGCGCC GCCGCACCTG CCCGAACCGG GCGCCGGCGT CTACGACGAG 
CAAGGCAATC TGATCGGCAT GGTGGGCGTC CGAGCGGACA GTGCCGAGTC GCTCTACATG 
GTCCTGCCAG TCGAGTGGAT GGCGACCGTG GCAGCGAAGA TGCCGGCCGT CGACCTGCCG 
CTCGAAGCGA CCGCCTGGAT GAGCCAGGCG CGCGCGTACG CGGTGGCAAA CGACGTCGAC 
GGGCTGATTC GCCATGACCT TGCATGGACG GCCGCGCGAC CGCAAAGCGC GTGGGCGTGG 
AACAACCTCG GCAATGCCTA CCGCACGAGC CGGCTGCCCG ATCGCGGCGC GCTCAGCCTG 
GCCGCCTATC GACGTTCGGT CGAAAACGAT CCGTCATACG CATTTGGCTG GTCTTCGCTC 
GGCAACACCT ATGCCGAGCT GGGACAGATG GATCGCGCAC TCGACGCGTT TCATGCCGGC 
ATGCGTGCCG ATCCGTCGGA CACGATGCTG CGGATGAATC TCGGCATCGC GTATTTGCGG 
CGCGGCGACA AGGCCGGTGC GCGACCGTGG TTCGAACGAG GGGTACATGA ACTGTCCGGT 
TCGCGCCAGG CCGATGCGTG GAGTCTGCTG GCCTCGACGC AGCCGGATGC CCAGGCCACC 
ATCGGCGTGC TGCACGACGG GTTGAAGGCC TTTCCCGACG ATGCACGGCT TTGGTACGCA 
CTCGGCCGTG CGCAATACGA TCTCGGCCAC CTGGCGGACG CGATCGCCAG TTACCAGCAC 
GCGCTGAAGG CGCAGAAGGG CGGCGATCCC GCCGCAACCG CGCTCATCCA GGGCGCGCTG 
ACCCAGGCGT ATGCGCTGCA AGGCCAGTCC GGCGACGCGT CCAGCGCGAT GCACAGTGCG 
GTTGAAGCGG CGCCGGACAA TGCTGAATAC TGGTTGCGGC TCGGCGCGCT GTACATGACA 
CAGTCGAACT ATGTCGATGC GTTGAGCGCG CTCGACCGGT CCCTCAAGCT GAACGACAGC 
GACGCGAGGG CGTGGCGGAT GCACGGCGTG ACGCTGGCGC AACTGGGCCA GCATGTGCAT 
GCCGTCGCAT CGTTCCGGCG CGCGGTTGCG CTGGACGAAT CGCTGGCGGC GGGGTGGGTG 
GTGCTCGCGG GCGAACTGAA CGAGATTGGT CAGCCCGACG AAGCGTCGGC CGCGGCTGCG 
CATGCATTGA AGCTTGATCC GTCGAACCGG TTGGCGCGGG AGGCGATGGG CATCGCGGCG 
AATCGCGGCA AGCGGCCCGA TGCGGCAGTC GGGATCTTCG AGGAAATGAA CCGCGCGTAT 
CCCGATGACG CGCAAATCAT GGCCAACCTG GCGGTCGCTT ATCGCCGCAC CGGGCGGGTC 
GATGACGCGG TGCAGTTGTA TCGCCGCGTC AAGACGCTCG ATTCGACGCT GGCCCAGCGG 
CTGTACGATG CGGAGCTCAA GGGCGTCGCA ACGCCTTGA 

 

Protein sequence

MEHRSGWGRA RRLLAGAWLL AAGMSMADGA VGSDDDAIGR RAPGEVDIVA GDVTTGGIVV 
APGRVATPCH RLAGRPAFDI ASADGRRLPA RLVAGNQDRD ICIIEATGLD VAAVPLTARS 
PEAATTAYLA GARFDRRDPV ALRVCCHAWA ADGGVHSGLL ASPNPAPPHL PEPGAGVYDE 
QGNLIGMVGV RADSAESLYM VLPVEWMATV AAKMPAVDLP LEATAWMSQA RAYAVANDVD 
GLIRHDLAWT AARPQSAWAW NNLGNAYRTS RLPDRGALSL AAYRRSVEND PSYAFGWSSL 
GNTYAELGQM DRALDAFHAG MRADPSDTML RMNLGIAYLR RGDKAGARPW FERGVHELSG 
SRQADAWSLL ASTQPDAQAT IGVLHDGLKA FPDDARLWYA LGRAQYDLGH LADAIASYQH 
ALKAQKGGDP AATALIQGAL TQAYALQGQS GDASSAMHSA VEAAPDNAEY WLRLGALYMT 
QSNYVDALSA LDRSLKLNDS DARAWRMHGV TLAQLGQHVH AVASFRRAVA LDESLAAGWV 
VLAGELNEIG QPDEASAAAA HALKLDPSNR LAREAMGIAA NRGKRPDAAV GIFEEMNRAY 
PDDAQIMANL AVAYRRTGRV DDAVQLYRRV KTLDSTLAQR LYDAELKGVA TP