Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3379 |
Symbol | |
ID | 4094069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 482454 |
End bp | 483326 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638016678 |
Product | LysR family transcriptional regulator |
Protein accession | YP_623247 |
Protein GI | 107025736 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.311743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAACTCC GGCATCTCCG CTACTTTCTG GCCGTCGCGG CCGCATCGAA TTTCACGAAG GCCGCCGAAA TGCTCGGTAT CGGCCAGCCG CCGTTGAGCC AGCAGATCAA GGCGCTCGAG AACGAGCTCG GCGTGGAGCT GTTCAAGCGG ACCGCGCGCG GCGCCGAGCT CACGCTGGCG GGTGAGGTGT TCGCGGAAGA GGCGCGACGC GTGCTCGACG ACGCCGAGCG CGCGGCACGG GCGGCCAGGC GCGCCGCGCG CGGGGAAACC GGTCATTTGC GGGTCGGCTT CACCGGCACG GCCGCGTTCA ATCCGAAAGT GTCGGATCTG ATTCGCCGCT TTCGGGAGGC GTTCCCGGAT GCCGAGCTGA CGTTGCAGGA AGCGACGTCG GGCGTGCTGC TGGAAGCGCT GGAGGCCGGG CGCCTCGACG TCGCGATCGT GCGGCCCGAG CGCCGCGTCG CCGCGACGCT GCGGGTAGCC GACTGGGACG AGGAGCCGAT GTTCGTCGCG CTGCCCGTCG CGCACCGGCT GGCGCAGCGC CGGCGCATCG AGTTGGCGGA GTTGGCCGAC GAGTCGTTCG TGCAGGTGCC GCGCGCGGCC GGCGGCGCGC TGTTCGACGA CATCGTCGCT GCGTGCCAGG CCGCCGGGTT CGAGCCGCGC ATGGCACAAC CGGCGCCGCA GATGGCGTCC GCGGTGACGC TGGTGGCGGC CGGGCTCGGC GTATCGGTCG TGCCGAAGGC GATTACGCAG GTGCAGGTGC CCGGCGTCGT ATACCGGCCG TTCGCGGGTA ACCGGTTTCG CGCGAGGCTG GCCATCGCGT CGCGCTGCGA CGAGCCGTCC GCGGTGGTGC GGAATTTTCT GTTGTTGGCG TAG
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Protein sequence | MELRHLRYFL AVAAASNFTK AAEMLGIGQP PLSQQIKALE NELGVELFKR TARGAELTLA GEVFAEEARR VLDDAERAAR AARRAARGET GHLRVGFTGT AAFNPKVSDL IRRFREAFPD AELTLQEATS GVLLEALEAG RLDVAIVRPE RRVAATLRVA DWDEEPMFVA LPVAHRLAQR RRIELAELAD ESFVQVPRAA GGALFDDIVA ACQAAGFEPR MAQPAPQMAS AVTLVAAGLG VSVVPKAITQ VQVPGVVYRP FAGNRFRARL AIASRCDEPS AVVRNFLLLA
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