Gene Bcen_3379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3379 
Symbol 
ID4094069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp482454 
End bp483326 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content71% 
IMG OID638016678 
ProductLysR family transcriptional regulator 
Protein accessionYP_623247 
Protein GI107025736 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.311743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACTCC GGCATCTCCG CTACTTTCTG GCCGTCGCGG CCGCATCGAA TTTCACGAAG 
GCCGCCGAAA TGCTCGGTAT CGGCCAGCCG CCGTTGAGCC AGCAGATCAA GGCGCTCGAG
AACGAGCTCG GCGTGGAGCT GTTCAAGCGG ACCGCGCGCG GCGCCGAGCT CACGCTGGCG
GGTGAGGTGT TCGCGGAAGA GGCGCGACGC GTGCTCGACG ACGCCGAGCG CGCGGCACGG
GCGGCCAGGC GCGCCGCGCG CGGGGAAACC GGTCATTTGC GGGTCGGCTT CACCGGCACG
GCCGCGTTCA ATCCGAAAGT GTCGGATCTG ATTCGCCGCT TTCGGGAGGC GTTCCCGGAT
GCCGAGCTGA CGTTGCAGGA AGCGACGTCG GGCGTGCTGC TGGAAGCGCT GGAGGCCGGG
CGCCTCGACG TCGCGATCGT GCGGCCCGAG CGCCGCGTCG CCGCGACGCT GCGGGTAGCC
GACTGGGACG AGGAGCCGAT GTTCGTCGCG CTGCCCGTCG CGCACCGGCT GGCGCAGCGC
CGGCGCATCG AGTTGGCGGA GTTGGCCGAC GAGTCGTTCG TGCAGGTGCC GCGCGCGGCC
GGCGGCGCGC TGTTCGACGA CATCGTCGCT GCGTGCCAGG CCGCCGGGTT CGAGCCGCGC
ATGGCACAAC CGGCGCCGCA GATGGCGTCC GCGGTGACGC TGGTGGCGGC CGGGCTCGGC
GTATCGGTCG TGCCGAAGGC GATTACGCAG GTGCAGGTGC CCGGCGTCGT ATACCGGCCG
TTCGCGGGTA ACCGGTTTCG CGCGAGGCTG GCCATCGCGT CGCGCTGCGA CGAGCCGTCC
GCGGTGGTGC GGAATTTTCT GTTGTTGGCG TAG
 
Protein sequence
MELRHLRYFL AVAAASNFTK AAEMLGIGQP PLSQQIKALE NELGVELFKR TARGAELTLA 
GEVFAEEARR VLDDAERAAR AARRAARGET GHLRVGFTGT AAFNPKVSDL IRRFREAFPD
AELTLQEATS GVLLEALEAG RLDVAIVRPE RRVAATLRVA DWDEEPMFVA LPVAHRLAQR
RRIELAELAD ESFVQVPRAA GGALFDDIVA ACQAAGFEPR MAQPAPQMAS AVTLVAAGLG
VSVVPKAITQ VQVPGVVYRP FAGNRFRARL AIASRCDEPS AVVRNFLLLA