Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3378 |
Symbol | |
ID | 4094068 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 481073 |
End bp | 482398 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638016677 |
Product | major facilitator transporter |
Protein accession | YP_623246 |
Protein GI | 107025735 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGCGG TTCATTTCAT ATATTGGACA TATACATGGC CGTGCGCAAG AATTCGCGTA TTCCGTCGCA CATCGAGTGC CTTCATGTCC TCCGCTTCGA TTTCCCGTTC CATGCCCGGC ACGCAGAACG CCGCACCCGA TGCGCTGCCG GCCGGCGTGT CCCCGCGCTC GGCCGCGTAC AAGCGCATCG CGTTCGCGCT GTTCCTCGCC GGCTTTTCCA CTTTCTCGCT GCTGTACTGC GTGCAGCCGC TGCTGCCCGC GTTCGCCCAT GAGTTCAACG TCGGCGCGGC ATCGAGTTCG CTGTCGCTGT CGTTGTCGAC CGGGATGCTC GCGGTGTCGA TCCTGTGCGC CGGCGCGCTG TCCGAACGGG TCGGGCGGCG CGGGCTGATG TTCGCGTCGA TGACGCTGGC CGCGCTGTTC AACCTGCTCG CCGCGTGGTC GCCGAACTGG CACCTGCTGC TGGTCTGGCG CGCGCTCGAA GGCTTCGCGC TGGGCGGCGT GCCGGCGGTG GCGATGGCCT ATCTCGCGGA AGAAATCGCC GCCGACGGGC TCGGCTTCTC GATGGGGCTC TATGTCGGCG GGACCGCGTT CGGCGGCATG ATCGGACGGA TCGGGATGAG CGCGCTCGAG GAGCACTTCT CGTGGCGCAC GGCGATGCTG TCGATCGGCG TCGTCGACCT GCTCGCGGCG ATCGCGTTCG TGATGCTGCT GCCGGCCTCG CGACGCTTCG TGAAGCGCAC CGACCTGACG CTGCGTCACC ACCTGCGGCT GTGGCACGCG CAACTGCGTC ATGCGCGCCT GCCGTTCGTG TTCGCGATCG GCTTCCTGGT GATGGGTGCG TTCGTGACGA TCTACAACTA CGCCGGGTTC CGGCTCATGG CGGCGCCGTT CAACCTGAGC CCGACCGCGT GCGGGCTGAT TTTCGGCGCA TACCTGTTCG GGATGGTGTC GTCATCGAGC GCCGGCGCGC TCGCCGATCG CCTCGGGCGG GCGCCGGTGC TGGTCAGCGG CATCGTCGTG TTCGCGGCGG GCCTCGCGCT GACGCTGTCG CACTCGCTCG TCGCGATCGT CGTCGGCATC GTGCTCGTGA CGATCGGCTT CTTCGTCGCC CACTCGGTCG CGAGCGGCTG GGTCGGCGCG CTCGCGGGCG CCGCGAAGGG GCATGCGGCT TCGCTGTATC TGCTGGCCTA CTACGTCGGG TCGAGCGTGC TCGGCTCGGT CGGCGGCGCG TTCTGGCAAC GCGGCGCGTG GACGAGCGTC GCCGCGTACG TCGCGGTGCT GCTCGTCATC GCATTGCTGG CCGCGCGGCG CTTGAGTCGT GCTTGA
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Protein sequence | MAAVHFIYWT YTWPCARIRV FRRTSSAFMS SASISRSMPG TQNAAPDALP AGVSPRSAAY KRIAFALFLA GFSTFSLLYC VQPLLPAFAH EFNVGAASSS LSLSLSTGML AVSILCAGAL SERVGRRGLM FASMTLAALF NLLAAWSPNW HLLLVWRALE GFALGGVPAV AMAYLAEEIA ADGLGFSMGL YVGGTAFGGM IGRIGMSALE EHFSWRTAML SIGVVDLLAA IAFVMLLPAS RRFVKRTDLT LRHHLRLWHA QLRHARLPFV FAIGFLVMGA FVTIYNYAGF RLMAAPFNLS PTACGLIFGA YLFGMVSSSS AGALADRLGR APVLVSGIVV FAAGLALTLS HSLVAIVVGI VLVTIGFFVA HSVASGWVGA LAGAAKGHAA SLYLLAYYVG SSVLGSVGGA FWQRGAWTSV AAYVAVLLVI ALLAARRLSR A
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