Gene Bcen_3353 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3353 
Symbol 
ID4094043 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp445939 
End bp446790 
Gene Length852 bp 
Protein Length283 aa 
Translation table11 
GC content65% 
IMG OID638016652 
ProductLysR family transcriptional regulator 
Protein accessionYP_623221 
Protein GI107025710 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCGTA CCCTGGACGT CGACCTGCTG CGTACCTTCC ACGCCGTCGC GAAGCTCGGC 
CGCTTCAAGG ATGCGGCCGT TCATGTGAAC CGCAGCCCGT CGTCCGTCAC CGCGCAGATT
CAGAAGCTGG AAGAGATGGT CGCGCAGCGG CTGTTTACGC GAAACAACCA GGCGGTCGAA
CTCACGCAGT TCGGCCACAA GCTGCTGAGC GACACCACCG AGTTTCTGTT GAGCCACGAC
CGGCTCGTCG AATCGCTGTC GCCGCAGATG CTGACCGGCA AGCTGCGGCT CGGCATCCCC
GATTCCTACG CGGCGCATTT CATGGCGGAG TTCCTGCCGC GCTTCGCCGC CGACCGGCCG
CTGCTCGAAC TGACGGTCGA AGCGCGCTCC AGCGAAGAGT TGCAGCAGCT GTTCGCGCGC
GGCCAGCTCG ACATCACGAT CGCCGTGGTG CCGAAAGCGC TGCCGCACGC CGAGCTGCTC
AGCAAGACCC ATCCGGTGTG GGTCGCCGCG CGCACCTTCA AGTTCAATCC CGATGCACCG
CTGCCGATCG CGGTGCAACT GCAGGGCTGC CCATACCGCG ATACCGCGCT GAATGCGCTG
AAGAAGGCGA AGATCGCGCA CCGGATGCTG CTCGAAAGCG CCAGTTCGCC GGCGGTCGAA
GCGTGTATTG CGAACGGGCT CGCGGTCGGC CTGATCGAGC ACGATCGCGT GTCGGGCAAC
CTGACGAGCC ATGTCGCCGG CATCGTGCTG CCCGATCTGC CGCCGCACCT GATCACGGTG
CTGACGGACG ACAGCAATCG CGCCGCGCTG CATCTGCGCG ACGTATTGAA AAGTACGTTC
AGGATCGGAT AG
 
Protein sequence
MPRTLDVDLL RTFHAVAKLG RFKDAAVHVN RSPSSVTAQI QKLEEMVAQR LFTRNNQAVE 
LTQFGHKLLS DTTEFLLSHD RLVESLSPQM LTGKLRLGIP DSYAAHFMAE FLPRFAADRP
LLELTVEARS SEELQQLFAR GQLDITIAVV PKALPHAELL SKTHPVWVAA RTFKFNPDAP
LPIAVQLQGC PYRDTALNAL KKAKIAHRML LESASSPAVE ACIANGLAVG LIEHDRVSGN
LTSHVAGIVL PDLPPHLITV LTDDSNRAAL HLRDVLKSTF RIG