| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3333 |
|---|
| Symbol | |
|---|
| ID | 4093946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 419560 |
|---|
| End bp | 420705 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638016632 |
|---|
| Product | (S)-2-hydroxy-acid oxidase |
|---|
| Protein accession | YP_623201 |
|---|
| Protein GI | 107025690 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0889608 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGTGA ACGATTGCCA TAATTTCCAC GACTTCCGCG AACTGGCGAA GCGGCGGTTG
CCGGGGCCGA TCTTCAATTA CATCGACGGT GCGGCCGACG ATGAAACCAC GTATCGACGC
AACACGAGCG CGTTCGAAAG CTGCGATCTG GTGCCGAACG TGCTGCGCGG CGTGCGCGAT
GTCGATCTGT CGGTGACGGT CATGGGGCAA AAGCTCGGCA TGCCGGTTTA TTGTTCGCCG
ACCGCGCTGC AACGCCTGTT TCATCATGAC GGCGAGCGGG CCGTCGCCGC AGCAGCCGCG
AAATTCGACA CGATGTTCGG CGTGTCGTCG CTCGGCACCG TGAGCCTGGA AGAGGCCCGT
GCGATCAGCC CGGGCCCGCA GGTCTACCAG TTCTACTTTC ACAAGGATCG CGGCCTCAAC
CGCGAGATGA TGAACCGCTC GAGGGAGGCC GGCGTGAACG TGATGATGCT GACGGTGGAC
AGCATCACCG GCGGCAATCG CGAGCGCGAC AAGCGCACCG GCTTCTCGAT TCCATTCAGG
CTGACGCTCG CGGGGCTGAC CGAGTTCGCG TTGAAGCCGG CCTGGGCGGT CAACTATCTG
ACCCACGAGC GGTTCCGTTT GCCGCAGCTC GACCGGCACG TCGACATGGG CGGCGGCGCA
ATGTCGATCA GCCGCTACTT CACGGACATG CTCGACCCGT CGATGTCATG GGACGACGTC
GCCGCGATGG TGCGCGAGTG GAACGGGCAG TTTTGCCTGA AAGGCGTGAT GTCGGTCGAC
GACGCCCGCA GGGCGGCGGA CATCGGTTGC ACCGGCATCG TGTTGTCGAA CCACGGCGGG
CGGCAGCTGG ACGGTTCGCG CGCCGCGTTC GACCAGCTTG CCGAGGTGGT CGACGCGGTG
GGCGACCGGA TCGACGTGAT GATGGATGGC GGCGTGCAGC GCGGTTCGCA CGTACTGAAG
GCGCTGGCGC TGGGGGCGAA GGCCGTCGGG CTGGGGCGTT ATTACCTGTT CCCGCTCGCC
GCCGCCGGGC AGCCCGGCGT CGAGCGCGCG TTGCAACTGA TGCGCACGGA AATCGAACGC
GACATGCGGC TGATGGGCTG CGCATCCGTC GCGCAGCTCG GGCGAAACCA GCTGCGTTTT
CGCTGA
|
|---|
| Protein sequence | MRVNDCHNFH DFRELAKRRL PGPIFNYIDG AADDETTYRR NTSAFESCDL VPNVLRGVRD
VDLSVTVMGQ KLGMPVYCSP TALQRLFHHD GERAVAAAAA KFDTMFGVSS LGTVSLEEAR
AISPGPQVYQ FYFHKDRGLN REMMNRSREA GVNVMMLTVD SITGGNRERD KRTGFSIPFR
LTLAGLTEFA LKPAWAVNYL THERFRLPQL DRHVDMGGGA MSISRYFTDM LDPSMSWDDV
AAMVREWNGQ FCLKGVMSVD DARRAADIGC TGIVLSNHGG RQLDGSRAAF DQLAEVVDAV
GDRIDVMMDG GVQRGSHVLK ALALGAKAVG LGRYYLFPLA AAGQPGVERA LQLMRTEIER
DMRLMGCASV AQLGRNQLRF R
|
|---|
| |