Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3330 |
Symbol | |
ID | 4093943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 416640 |
End bp | 417581 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638016629 |
Product | periplasmic binding protein/LacI transcriptional regulator |
Protein accession | YP_623198 |
Protein GI | 107025687 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.740967 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATCAGGA GCAAGGTGTT GAACGCGATC GTCGGGCTGA CGTTCGCCGC CGGCGTCACG GCCGGTGCGC AGGCGCAGGA AACCTATATC CCGCTGATCT CGAAAGGCTT CCAGCATCAG TTCTGGCAGG CCGTGAAATC GGGCGCGACG CAGGCCGCGA AGGACTACAA GGTGAAGGTG ACGTTCGAAG GGCCCGAAAC CGAGGCGATG GTCGACAAGC AGATCGACAT GCTGTCGGCC GCGATCGCGA AGAAGCCGGC CGCGCTCGGC TTCGCGGCGC TCGACAGCAA GGCTGCACTG CCGCTGCTGA AGAGGGCGCA GGCCGAGAAG ATCCCGGTGA TCGCGTTCGA CTCGGGCGTG GACAGCGACA TTCCGGTGAC GACGGCCGCG ACCAACAACA AGGCCGCGGC CGCCCTTGCG GCCGACAAGC TCGCCGCGCT GATCGGGGAC GAAGGGCAGG TGGCGGTGGT CGCGCACGAC CAGACGAGCC GCACCGGCAT CGACCGCCGC GACGGCTTCC TCGACCGGAT GAAGTCCGCG CACCCGAAGG TGCAGGTCGT GACCGTGCAG TACGGCGAAG GCGATCAGTT GAAATCGACC GAAGTGACGA AGTCGATCCT GCAGGCGTAT CCGAAGCTCA AGGGGCTGTT CGGCACCAAC GAAGGCTCGG CGATCGGCGT GGTCAACGGC GTGCGCGAGA TGAAGCGCAA GGTCGTGATC GTCGGCTACG ATTCCGGCAA GCAGCAGAAG GACGCGATCC GCAGCGGGCT GATGGCCGGC GCGATCACGC AGAACCCGAT CGGGATCGGC TACAAGACGG TCGAGGCGGC CGTGAAGGCG ATCAAGGGCG AGAAGCTGCC GAAGGTCATC GATACCGGTT TCTACTGGTA CGACAAGACC AATATCGACG ATCCGAAGAT CGCGGCGGTG TTGTACGACT GA
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Protein sequence | MIRSKVLNAI VGLTFAAGVT AGAQAQETYI PLISKGFQHQ FWQAVKSGAT QAAKDYKVKV TFEGPETEAM VDKQIDMLSA AIAKKPAALG FAALDSKAAL PLLKRAQAEK IPVIAFDSGV DSDIPVTTAA TNNKAAAALA ADKLAALIGD EGQVAVVAHD QTSRTGIDRR DGFLDRMKSA HPKVQVVTVQ YGEGDQLKST EVTKSILQAY PKLKGLFGTN EGSAIGVVNG VREMKRKVVI VGYDSGKQQK DAIRSGLMAG AITQNPIGIG YKTVEAAVKA IKGEKLPKVI DTGFYWYDKT NIDDPKIAAV LYD
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